| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1618 |
|---|
| Symbol | |
|---|
| ID | 4415395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1534994 |
|---|
| End bp | 1535962 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639669783 |
|---|
| Product | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| Protein accession | YP_811135 |
|---|
| Protein GI | 116491591 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.231064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTAA TTGAGATTAA TAATTTAAAA GTTCATTATC CGATTCGTTC AGGTTTTTTC
AATCGTGTTA CCGACTCGGT CAAAGCAGTT GATGGAATTA GTTTCAATAT CGAAAAAGGG
CAAACATATG GTCTAGTCGG CGAATCAGGA TCGGGAAAAT CGACAACCGG GAAATCAGTT
GTCGGTCTTG AGAAAGTTAC TAGCGGTTCG ATTCTCTACA ACGGCGTCGA TATTACCAGT
GAAAAAAACC GAAAAAAATT GAATTATAAC CACGATGTAC AAATGATTTT TCAGGATTCT
CTTTCAAGTT TGAATCCAAG AAAACGAATT GAGGACATTA TTGCCGAACC ATTAAGAAAT
TTTGAGCATT TGAGCAAGAA TGAAGAAAAA ATGCGTGTCC TTCGTTTACT CGACATCGTT
GGTTTGAGTG TAGACGCCTT GTATCAATAT CCTCACCAGT TTTCCGGTGG ACAAAGACAA
AGAATCGGTA TTGCCAGAGC CGTAGCTACA AATCCAAAAT TGATCGTTGC TGACGAACCG
GTCTCTGCCT TGGATCTTTC TGTTCAGGCC CAAGTTTTAA ATTTTATGAA AAAAATTCAA
AGAGAATTCG GAATCACATA CCTGTTCATT TCTCATGATT TGGGTGTTGT TCGCCATATG
TGCAATAACA TCGCAATCAT GAACAAGGGA AGGCTGGTCG AAGTCGGTAG TCGTGATGAT
ATTTATAATC ATCCTTTACA CATATACACG AAACGACTAC TGGCTGCAAT TCCCCAAATC
GATGTTGATC ATCGGGAAGA GCACCGTGAA AAAAGGCTTC AGATTGAAAA AATATATCAG
GAACAGTCCT CGAAATATTA TGATCAAAAT GGTTTGGCTT ATCCACTAGT TAAAGTTTCT
TCTATGCATA GTGTTGCTTT GCCACCTCAG GAAGCCAAGA AATATTCAGA AAAAGAGGTG
GAAGTATAA
|
|---|
| Protein sequence | MSLIEINNLK VHYPIRSGFF NRVTDSVKAV DGISFNIEKG QTYGLVGESG SGKSTTGKSV
VGLEKVTSGS ILYNGVDITS EKNRKKLNYN HDVQMIFQDS LSSLNPRKRI EDIIAEPLRN
FEHLSKNEEK MRVLRLLDIV GLSVDALYQY PHQFSGGQRQ RIGIARAVAT NPKLIVADEP
VSALDLSVQA QVLNFMKKIQ REFGITYLFI SHDLGVVRHM CNNIAIMNKG RLVEVGSRDD
IYNHPLHIYT KRLLAAIPQI DVDHREEHRE KRLQIEKIYQ EQSSKYYDQN GLAYPLVKVS
SMHSVALPPQ EAKKYSEKEV EV
|
|---|
| |