| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1564 |
|---|
| Symbol | |
|---|
| ID | 4415428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1481086 |
|---|
| End bp | 1482711 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639669732 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_811084 |
|---|
| Protein GI | 116491540 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATC CAGTAAGTAT TTTAAATGAT CCTTTTATTA ACAAAGGAAC TGCTTTTACG
GAAGCGGAGA GAGAGGAGCT TGGTTTAAAC GGTTTATTAC CGGCCAAGGT TCAGGCTTTA
CAAGAGCAAG TTGATCAGAC TTATGCTCAA TTTCAAAGCA AGGTTTCAAA TCTCGAAAAA
CGATTGTTTT TAATGGAAAT ATTCAATACG AATCACGTGT TGTTTTATAA GCTTTTTTCT
CAACATGTTG TTGAATTTAT GCCAATTGTT TATGACCCGA CAATTGCTGA TACAATTGAA
AATTATTCGG AATTATTTGT TGAACCGCAA GGTGCCGCTT TTTTGGATAT TAATCATCCG
GAAAACATTC AATCGACTCT GAAAAATGCT GCTAATGGCC GCGATATCAA GCTGCTGGTC
GTTTCTGATG CCGAAGGTAT TCTTGGGATT GGAGACTGGG GTGTCCAGGG TGTTGATATT
GCTGTCGGCA AACTGATGGT TTATACAGTT GCGGCCGGAA TCGATCCATC AACAGTTCTT
GCAGTTGTTA TTGATGCTGG AACAAATAAC GAAAAGCTTT TGAAAGATCC TATGTATTTG
GGAAATAAAT TTAATCGTGT TCGTGGCGAT AAGTACTATG ATTTTATCGA CAAATTTGTT
AATCATGCCG AATCGCTTTT TCCTAATTTA TATTTGCATT GGGAAGATTT TGGCCGTTCG
AATGCTTCTA ATATCTTAAA CAGCTATAAA GATAAAATTG CTACTTTTAA TGATGATATT
CAAGGAACTG GAATCGTCGT TCTTGCCGGC GTTCTTGGAG CGTTGAAGAT TTCCGGTCAG
AAATTAACTG ATCAAACTTA CATGAGCTTC GGTGCCGGAA CTGCTGGAAT GGGAATTGTT
AAACAGTTGC ATGAAGAAAT GGTTGAACAG GGTCTTTCCG ACGAAGAGGC TAAAAAGCAT
TTCTTCCTTG TTGACAAACA AGGCCTCTTG TTTGACGATG ATCCGGATTT AACTCCAGAG
CAAAAGCCTT TCGCTGCTAA ACGAAGTGAT TTCAAAAATG CTAATCAATT GACCAATCTC
CAAGCAGCTG TTGAAGCTGT CCACCCGACC ATTTTGGTCG GAACCTCGAC ACATCCAAAT
TCCTTTACTG AAGAAATTGT TAAAGATATG TCTGGTTATA CTGAAAGACC AATCATTTTT
CCAATTTCCA ATCCAACAAA ATTAGCCGAA GCAAAAGCCG AAGATGTTTT GAAATGGTCT
AATGGAAAAG CCTTGATCGG TACTGGTGTT CCAGTTGACG ATATTGAATA TGAGGGCAAC
GCTTACCAAA TCGGTCAGGC CAACAATGCC TTGATCTATC CAGGTCTTGG CTTTGGTGCC
ATTGCCGCTC AATCAAAGCT GCTTACGCCT GAAATGATTT CTGCTGCTGC CCATAGTCTT
GGAGGAATCG TTGATACAAC AAAAGTTGGT GCTGCTGTTT TGCCACCAGT TTCAAAATTA
GCCGACTTTT CGCGTACAGT CGCTGTCGCT GTCGCTAAAA AAGCTGTTGA ACAAGGTCTT
AATCGCCAGC CGATTGATGA TGTTGAAAAG GCCGTCGACG ATTTGAGGTG GGAGCCGAAA
TACTAA
|
|---|
| Protein sequence | MTDPVSILND PFINKGTAFT EAEREELGLN GLLPAKVQAL QEQVDQTYAQ FQSKVSNLEK
RLFLMEIFNT NHVLFYKLFS QHVVEFMPIV YDPTIADTIE NYSELFVEPQ GAAFLDINHP
ENIQSTLKNA ANGRDIKLLV VSDAEGILGI GDWGVQGVDI AVGKLMVYTV AAGIDPSTVL
AVVIDAGTNN EKLLKDPMYL GNKFNRVRGD KYYDFIDKFV NHAESLFPNL YLHWEDFGRS
NASNILNSYK DKIATFNDDI QGTGIVVLAG VLGALKISGQ KLTDQTYMSF GAGTAGMGIV
KQLHEEMVEQ GLSDEEAKKH FFLVDKQGLL FDDDPDLTPE QKPFAAKRSD FKNANQLTNL
QAAVEAVHPT ILVGTSTHPN SFTEEIVKDM SGYTERPIIF PISNPTKLAE AKAEDVLKWS
NGKALIGTGV PVDDIEYEGN AYQIGQANNA LIYPGLGFGA IAAQSKLLTP EMISAAAHSL
GGIVDTTKVG AAVLPPVSKL ADFSRTVAVA VAKKAVEQGL NRQPIDDVEK AVDDLRWEPK
Y
|
|---|
| |