| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1486 |
|---|
| Symbol | |
|---|
| ID | 4416601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1402540 |
|---|
| End bp | 1404057 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639669658 |
|---|
| Product | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase |
|---|
| Protein accession | YP_811010 |
|---|
| Protein GI | 116491466 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.233667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGAG AAATTTTAAA CAAAAAAGAA TTTTATCAGC TTGTTAATGA TTTTGATCTG
ACGGAAAAAG AGAAAACTGT TTATTGGAAA GAGCTCTCGA ATGGTTTTTT CTCTTCTTTT
GAAGAGCTTT CTAAACATTA CCAATCGCCG GTAAAAAAGC CGGTCTATAG GAGAACTTTC
CAAAGCCGGC CTTATGCTGA CGATCGATAT AATGCCTGGT ATGTCAAAAC CAAAATCGAG
CACGCTGAAA GTGGCTCCTT ATTAGGAAAG AAAATTGCTG TTAAAGACAA TATTTCGATT
GCCGGCGTAC CAATGAGTAT GGGAACGAAA CTGCTGGAAA GTTATAAGCC AAAGGAAGAC
GCAACTGTTA TTAGCAGACT CTTGGATCAT GGAGCCGATA TTCTTGGAAA ATCCGTTAGT
GAAAATTTAT TCTGTTCCGG AAGCAGCTTT ACAGCCGACA GCGGTCCAGT CGAGAATCCA
AAAGTACCAG GATATTCAGC TGGTGGTTCT TCGAGCGGTT CGGGTGCTCT GGTTGCCAGC
CAACAAGTTG ATATGGCTTT AGGCTGCGAT CAAACCGGGT CAATTCGAAT TCCAAGTGCC
TGGTGTGGTA TCTATGGTCT CAAACCAACG CGTGGATTGG TTCCCTACAC TGGAATCGGC
TCGGTCGATC AATTGCTTGA TACTGTTGGA CCAATGGCTA ACAAGGTTTC TGATCTGGCT
TTGCTTTTAG ATGCAATCGC CGGTAAAGAT GGATTGGACG GTCGTCAAGC CTGGTTGAGC
ATGGGGCAGA GTTTTTCATT TGCTGAACAA CTGTCTTCTG AAATTTCCGG TAAAAAAGTC
GGTCTTCTCC AACAAGGATT TAGGATTGAA GGTGTTTCTG ATCCTGAGGT TGATCAAACA
GTTCAAAAGA ATGTTGGTTA TTTCAAAGAA GTCGGTGTTT CGGTTCAAGA TATATCTGTT
CCTGAATTCG ATTTAGCGAG AAACATTGCT GATGTTATTA ACACACTCGG GACTTCTCGA
CAGCAGCTTA GATATGGTGG CAGCAGTTTT GGAACTGATA CTTATTATCC AATTGATCTT
AGCGAAACCT TTAAAAGCAG GATCAATAGT AAAACGGTCA CATCTTTAGC GCCGCTTGTT
CAACTGATGT TATACGGCGG TGAAATGGCG GATGGCCAAA TTGAAGATTA CTATGGTCGT
GCTCAGAATA TGATCCCGCT AGTTAAAAAA GCTTTTGAAG CGGCTTTTAA AGAGGTTGAC
ATTCTGGCTC TACCAACGGT TCCTTTCACT GCAAGAAAAT TACCGCCACT TAAGGCTAAT
ATAAAAGAAC AGATTGATAG TGGCGTTGGA GCTGGTCATA ACGATGGCCC TTTTAATATT
ATTGGCTGCC CAGCTATTAG TATCCCTTGC AAATTAGATG AAGGACAAAA GCCAATCGGC
ATGATGCTGG TCGCACCTTT TGGCCAAGAT CAACAGCTAC TTGATTTTGC TTATGCTTAT
GAAAGAATGA TAGCTTGA
|
|---|
| Protein sequence | MAREILNKKE FYQLVNDFDL TEKEKTVYWK ELSNGFFSSF EELSKHYQSP VKKPVYRRTF
QSRPYADDRY NAWYVKTKIE HAESGSLLGK KIAVKDNISI AGVPMSMGTK LLESYKPKED
ATVISRLLDH GADILGKSVS ENLFCSGSSF TADSGPVENP KVPGYSAGGS SSGSGALVAS
QQVDMALGCD QTGSIRIPSA WCGIYGLKPT RGLVPYTGIG SVDQLLDTVG PMANKVSDLA
LLLDAIAGKD GLDGRQAWLS MGQSFSFAEQ LSSEISGKKV GLLQQGFRIE GVSDPEVDQT
VQKNVGYFKE VGVSVQDISV PEFDLARNIA DVINTLGTSR QQLRYGGSSF GTDTYYPIDL
SETFKSRINS KTVTSLAPLV QLMLYGGEMA DGQIEDYYGR AQNMIPLVKK AFEAAFKEVD
ILALPTVPFT ARKLPPLKAN IKEQIDSGVG AGHNDGPFNI IGCPAISIPC KLDEGQKPIG
MMLVAPFGQD QQLLDFAYAY ERMIA
|
|---|
| |