Gene OEOE_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_1448 
Symbol 
ID4415917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand- 
Start bp1362896 
End bp1363465 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content41% 
IMG OID639669622 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_810974 
Protein GI116491430 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAAAT TAATCGATAC GAGCTTGCAG GATGTCAAGT TGATTGAAAC AGAGGTTTTT 
GGTGATAAAC GGGGTTTCTT TACGGAGACC TGGACGAAAG AAAAGTTTGA AAAACTTGGT 
TTAAAATTTG ATTTTACTCA GGATAATCAG TCTCTTTCGG CCGAAGCAGG TGTTTTAAGA 
GGCATGCATT ATCAATTGGC GCCATACGCG CAAACGAAGA TTGTTCGGGT TGTTACCGGA 
GTTGTTTGGG ACTGCTTGGT TGATATGCGC AAAGGTTCAC CGACATACGG CAAATGGGAA 
GGATACATTC TTTCCGAATA TAATCATCGT CAATTATTGG TTCCAAAGGG ATTTGCCCAC 
GGTTTTGTGA CATTGACTCC GAATGTCAAT TTTGTCTATA AGGTTGATGG ATATTATGCG 
CCAAAAGCCG ACCGAGGAAT TGCTTTTGAT GATCCCGATG TTGGTATTCA GTGGCCAACC 
AATGTCGAAC ATGCAATTAT GTCCGATAAG GATTTAAAGC ATCCACTGCT CAAGGATGCT 
GAAAATAATT TCGTTTATGG GGAGATTTGA
 
Protein sequence
MVKLIDTSLQ DVKLIETEVF GDKRGFFTET WTKEKFEKLG LKFDFTQDNQ SLSAEAGVLR 
GMHYQLAPYA QTKIVRVVTG VVWDCLVDMR KGSPTYGKWE GYILSEYNHR QLLVPKGFAH 
GFVTLTPNVN FVYKVDGYYA PKADRGIAFD DPDVGIQWPT NVEHAIMSDK DLKHPLLKDA 
ENNFVYGEI