| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1440 |
|---|
| Symbol | |
|---|
| ID | 4415909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1353552 |
|---|
| End bp | 1355840 |
|---|
| Gene Length | 2289 bp |
|---|
| Protein Length | 762 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639669614 |
|---|
| Product | superfamily I DNA/RNA helicase |
|---|
| Protein accession | YP_810966 |
|---|
| Protein GI | 116491422 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATA ATATTAAGGC ACAAGAACAG CGGCATCTCG ATTTGGTTTT GCAAAAACTT
GATGAAAGAA TTAGCGAAAC TCAAGGACGG ATCGACCGGG CCAATGACAA TTTAAAAGAA
GCTGAAAAGG GCTGGCGCGA TATTAGAGTT AAATTCTCTG ATTTCAATGC AGTGGTCGAG
ACTGGAGCTT CGGTTCACGC ACAGCAACAG GTCTTGGCAC AAAAAGAGCG TGATATGTCT
CAGGCTGAAG TCCAGTTTGA GACATTGCAA AAATTGCGGG GAAGGCCTTA TTTCGCCCGG
ATTGATTTTA CCGATATCAG TAATCAGTCC AACCAAACAG AAACGATTTA TATCGGTTTG
GCATCTTTTT CCGACAATGA TGGTCATTTT TATGTTTATG ACTGGCGGGC TCCGATATCT
TCAATATATT ATGATGGCGG CCTTGGGAAA ATTGATTATC AGACTCCGGT CGGCAAACAA
ACGGCGGATG TTAAATTAAA GCGTCAGTTC GAAATTGCCG ACGGAATTAT TCTGACGGTT
TTCGATACCG AAGAAGCGGT CGGCGATAAG CTTTTGCTAA ATGCTCTGTC TTCTGATTCT
TCGACAAAAA TGAAATCGAT CGTCACTACG ATTCAACATG AACAAAATCG AATTATTCGG
GATACCGATT CGGATTTGTT GTTTGTTCAA GGAGCGGCCG GATCTGGGAA AACAGCAGCT
GTTTTACAGC GGGTTGCTTA TCTTTTGTAT CGTTATCGCG GGAAGATAAC TTCTGGACAG
GTAGTCCTTT TTTCGCCCAA TCAGGTGTTT AACGATTATG TGAATGAAGT TTTGCCGGAT
CTTGGTGAAA ATAACATGAT CCAGATGACT TTTTATCAGT ACGCTAATTA TCGTTTGCCA
AAAATTCAAG TGCAGACCCT TGCCGAGCGA TTCGAGAGTG AAAACGACCC GGAATCGGTT
AAAATGACCA ATTTAAAGGG CAGTTTGGCT TTTTTCAAGG CTGTTGGTCG TTATTCTCAA
AAAATTAGCC GCAGCGGAAT GAGTTTTCGC AGTCTCGCTT TTCGGGGAGA ACCTTTCTTT
AAAAGCGAAG ATATCGAAAA AATCTATTAT TCATTCAATG ACAATTATTC GCTCAATCAG
CGTTTAGAAG CAACGAAACA GGCTTTATTA AGAAAAGTTT TCGGCCGAAT TTCTTCAGAA
ATGAAAAAAG ACTGGGTTGA CATTGCGATT CAAAATCTCC AAGCCGATGA ATTGGAAAGT
ATGCTTGGCG ACCCTGATAA ACGCCAATAC GAATCGGAGA AAAAAGAGCG TAATGAACTG
GCACGAATAA TTGTTCGGAA TGCTTTAAAA CCAATTATTC GACGAATCCG TCATGGAATT
TTTATGAATC CAAACAAATT GTTTTTGGGT TTTCTAAAAT CACTACCTCA ATTAATCAAT
CTCGCCGATT TCGATATTTC CGATCAGGAA TGGCAGTCTG CTTTTGAAGG ATCAAAATCT
GATTTAAGTA CTCAAAAACT TAATTTGAAC GATACGGCGA TTTACTTGTA TTTATTTGAT
TTAGTCAATG GACATCATGG GGATCGAACA ATTCGTTTTC TATTCGTTGA TGAGGTTCAG
GATTATACGG CTTTCCAACT GGCTTTTTTG AAGTTTTCAT TTCCGAAAGC CAAATTTACC
CTGCTGGGTG ATTTGAATCA GGCGATTTTT ACCCGAACAA ATGCGGGAAC TTTGCAATCG
GCAATGTATG AGTTGTTCGA TCCAAAGAAA TCAAAGACGA TCAAATTAAC AAAAACTTAC
CGTTCGACCG AACAAATCAC TAATTTTACA AGTGCTCTGC TGAAAGATTC TGAAACAATC
GAAGCTTTTG CCCGCGAGGG TGAAAAACCG CTTTTTCGAA GTGGCGATTC CTTGAAAAAT
CTTGCTGATA GTCTATCTCG CAACCTTAAA GCTGACTTAA CGACCGCTAT CATTACGAAG
ACGGCCGCTC AGGCAAAAAA TGTTTATGAA GAACTACAAA AAAAGAATTA TCAAGCGACC
TTGATTACCT TGGAAAACCA GCGTTTGGTT CCCGGGACAA TTATTATTCC CGGTTATTTA
GCCAAAGGGC TCGAATTCGA TGCTGTTATT CTTTGGCAGG CCGACAATCG AAATTACGGT
AGTGAAGACG ATCGGGAATT ATTGTACACA ATCGCCAGTC GTGCTATGCA CCGTTTGACA
GTTCTTGCCG ACGATTCATT CAGCAGCCTG TTTGATCAAA TCGATCAGCA ACTTTATGAA
AATATTTGA
|
|---|
| Protein sequence | MKDNIKAQEQ RHLDLVLQKL DERISETQGR IDRANDNLKE AEKGWRDIRV KFSDFNAVVE
TGASVHAQQQ VLAQKERDMS QAEVQFETLQ KLRGRPYFAR IDFTDISNQS NQTETIYIGL
ASFSDNDGHF YVYDWRAPIS SIYYDGGLGK IDYQTPVGKQ TADVKLKRQF EIADGIILTV
FDTEEAVGDK LLLNALSSDS STKMKSIVTT IQHEQNRIIR DTDSDLLFVQ GAAGSGKTAA
VLQRVAYLLY RYRGKITSGQ VVLFSPNQVF NDYVNEVLPD LGENNMIQMT FYQYANYRLP
KIQVQTLAER FESENDPESV KMTNLKGSLA FFKAVGRYSQ KISRSGMSFR SLAFRGEPFF
KSEDIEKIYY SFNDNYSLNQ RLEATKQALL RKVFGRISSE MKKDWVDIAI QNLQADELES
MLGDPDKRQY ESEKKERNEL ARIIVRNALK PIIRRIRHGI FMNPNKLFLG FLKSLPQLIN
LADFDISDQE WQSAFEGSKS DLSTQKLNLN DTAIYLYLFD LVNGHHGDRT IRFLFVDEVQ
DYTAFQLAFL KFSFPKAKFT LLGDLNQAIF TRTNAGTLQS AMYELFDPKK SKTIKLTKTY
RSTEQITNFT SALLKDSETI EAFAREGEKP LFRSGDSLKN LADSLSRNLK ADLTTAIITK
TAAQAKNVYE ELQKKNYQAT LITLENQRLV PGTIIIPGYL AKGLEFDAVI LWQADNRNYG
SEDDRELLYT IASRAMHRLT VLADDSFSSL FDQIDQQLYE NI
|
|---|
| |