Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_1422 |
Symbol | |
ID | 4415882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | - |
Start bp | 1335988 |
End bp | 1336545 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639669596 |
Product | transcription antitermination protein nusG |
Protein accession | YP_810948 |
Protein GI | 116491404 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.002098 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAG AAGAACCACA AAAAGATTGG TATGTCGTTC ATACCTATTC AGGTTATGAA AATCGAGTTA AACAAAATTT GGAACAGCGT CGTGAATCGA TGGGAATGAC TGATTTTATT TTTCAAGTTA TCGTGCCTGA AAATGAAAAG ATCAAAACTG GCCCAAATGG CGAATTAAAA AAAGTTGTTG AAAATGATTT CCCCGGTTAT GTTTTGGTGG AAATGGTAAT GACCGATCAG TCCTGGTACG TTGTTCGTAA TACTCCGGGA GTAACCGGAT TTTTGGGCTC CCATGGTCAA GGGTCAAAAC CAAATCCTGT TACAAAAGAC GAAATTGATC GGATTATGCA TCGAATGGGC TTGATTGAGC GCAAAGTCGA TGATCTTAAT GTTAAAGTCG GAGAAACTGT CTCGATTATC GGTGGCGCCA TGAATGGCAT GGAAGGTAAA ATTACCGCCA TTGATAGGGA AAAGCAAGAA GTCCAAGTAC TTGTCGACAT GTTTGGGCGT GAAACCGAAA CAGAAGTTCC ATTTAATGAC ATCGATAAAA TATATTGA
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Protein sequence | MAEEEPQKDW YVVHTYSGYE NRVKQNLEQR RESMGMTDFI FQVIVPENEK IKTGPNGELK KVVENDFPGY VLVEMVMTDQ SWYVVRNTPG VTGFLGSHGQ GSKPNPVTKD EIDRIMHRMG LIERKVDDLN VKVGETVSII GGAMNGMEGK ITAIDREKQE VQVLVDMFGR ETETEVPFND IDKIY
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