Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_1378 |
Symbol | |
ID | 4415484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | - |
Start bp | 1288010 |
End bp | 1289548 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639669553 |
Product | major facilitator superfamily permease |
Protein accession | YP_810905 |
Protein GI | 116491361 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0602023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGCCA AATCAGTTGA TATTCACGGA AAAAATTATA GTCGCGGCCT ATTTATGCTA GCCGTTTTGG TTGCTACCTT CGCGGGAATG CTGATGGGAA CTTCTTTAGG AACTGCTCTG CCGACATTAA TGAATGATTT TAATATTGAC CTGGCAACGG CTCAAGAGGC AACTACTTGG TTTTTGCTGG CAAATGGAAT TATGGTTCCT GTTTCAGCTT ATTTGTCGAC CAAGTTTCCA ACTAAATGGC TTTATGTTGT TGCGTTCTCA ATGCTTCTAA TAGGGCAATA TATTTCTTAT AGTGCCCCGA ACAACAACTG GAATTGGTTT TTAGCGGGAC GAATTGTTCA GGCAATTGCC GTTGGAATTA CAATGCCTTT GATGCAAGTC GTTATTGTTT ACATATTTCC GGCTAAAGAT CGTGGAGCCG CGATGGGCTT GGGTGGTTTG GTTATCGGAA TGGCTCCGGC GATTGGCCCG ACACTTTCCG GATGGATTTT AGATAAGAAC CATACGATTC TCGGCCTGAC TTTGTCTGAT TCCTGGCGTT CCATTTTCTT ATTACCGATG TTTGTAATTG CTTTAGACCT GGTTATGAGT TTGTTCTTGT TGCATGATGT TGTGCCAAAT CAAAATATTA AGCTCGATAT TCGTTCTTTG GTTCAGTCTA CGGTCGGTTT TGGTCTCTTT TTATGGGGAC TGACCAATGT TGCCAATTCA CACTATGATG GTTGGTTTGA TATTCCGCAT GTTATTATTC CGGGATTGAT TGGTATTTTC TTTATTGCAA CTTTCGTTTT GCATCAATTG GAAATGAAAC ATCCTTTCTT GGATGTCCGC GTTTTCAAAA TAAAACAATT TTCGGTCACA ACTATTTTGA TCTCTCTATC GATGATGGCA ATGATGGGAA TTGAAATGAT GATTCCAACT TATTTGCAGG AACTTCGTGG TTTATCGCCA TTGTCATCCG GTTTAACTCT ATTTCCTGGA GCGGTTTTGA TGGGAGTTAT GTCTCTGGTT GCCGGAGCAG TTTATGATCG AAATGGTGCA AAACGGTTAT CGAGAGTCGG TTTCATGATT TTATCGATTG CAACATTTCC TTTCTTATTC ATTGGTTTAA ATACGCCAAA GTCTTTTATA ACAATCTTTT ACGCTTTGAG AATGTTTGGA ATCGCGATGG TTATGATGCC GCTTACCGCT TCGGCAATGT CTGCACTCCC AAAAGAAAAA GCTTCCGATG GGACTGCCGC CAACAACACT GCCAGACAGG TCGCTTCTGC AATTGTTGTT TCCTTGCTTT CTTCTGTGAC GCAAAATATT GCCAATACAG AGGGGCCAGC CAAAGCTTTG AAATCGGAAA ACGTTTTGGA ATTTAGTCGA AAAACTCTCG ATGTAACCTT AACTGGTTTT CATGCTTCGT TTGCAATTGC TTTGATTTTT GCTCTTCTTG GATTTATCAT TTCCGGTTTT CTTCATTCAG GTAAGATTAT TAGCAACGAT CCGAATCTCC TCGATGAGAA AGGGGACAAA CAATCATGA
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Protein sequence | MSAKSVDIHG KNYSRGLFML AVLVATFAGM LMGTSLGTAL PTLMNDFNID LATAQEATTW FLLANGIMVP VSAYLSTKFP TKWLYVVAFS MLLIGQYISY SAPNNNWNWF LAGRIVQAIA VGITMPLMQV VIVYIFPAKD RGAAMGLGGL VIGMAPAIGP TLSGWILDKN HTILGLTLSD SWRSIFLLPM FVIALDLVMS LFLLHDVVPN QNIKLDIRSL VQSTVGFGLF LWGLTNVANS HYDGWFDIPH VIIPGLIGIF FIATFVLHQL EMKHPFLDVR VFKIKQFSVT TILISLSMMA MMGIEMMIPT YLQELRGLSP LSSGLTLFPG AVLMGVMSLV AGAVYDRNGA KRLSRVGFMI LSIATFPFLF IGLNTPKSFI TIFYALRMFG IAMVMMPLTA SAMSALPKEK ASDGTAANNT ARQVASAIVV SLLSSVTQNI ANTEGPAKAL KSENVLEFSR KTLDVTLTGF HASFAIALIF ALLGFIISGF LHSGKIISND PNLLDEKGDK QS
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