| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1242 |
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| Symbol | |
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| ID | 4415344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 1157866 |
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| End bp | 1159587 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639669426 |
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| Product | mRNA degradation ribonuclease J1/J2enzyme |
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| Protein accession | YP_810783 |
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| Protein GI | 116491239 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.752598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAA AGGAACAAAG CGTAAATACT TTTGCGCATG AAGTTAAACT TGAGAATAAT
GAAGTTGGAG TGATGGCCCT CGGAGGCTTG GGCGAAATCG GGAAAAATAC CTATGCTATC
CAGTACCAAG ACGAAATTGT CGTAATTGAT GCCGGTATCA TGTTTCCCGA AGATGATCTG
TTGGGAGTTG ATTATGTGAT TCCCGATTAT ACCTATTTAG TTCAAAACAT TGAAAAGGTT
AAGGCCTTGG TGATTACCCA TGGACACGAA GATCATATTG GTGCAATTTC CTACTTTTTG
CGGGCCGTTA ACGTGCCTGT CTATGCCCCA CCGTTTGCGC TGGCTTTAAT TAAAGGAAAA
CTCGAAGAAC ACAACTTATT AAAGAAAACC GAACTCCACG AAATAAAGCC AGATTCTTTT
TTGGATTTTG GCAAGCTATC GGTAGAATTC TTTCAAACGA CCCACTCGAT CCCCGATACA
GTTGGTGTTG CTGTTCATAC GCCTAAAGGA ACTATTGTCG AAACCGGTGA TTTTAAATTT
GATCTGACTC CGGTTACCAA CCAGTATCCT GATATGTTGA AAATGGCAAA AATCGGCCGA
GAAGGCGTTC TGCTGTTAAT GTCCGATTCG ACTAACGCCG AACGGCCGGA ATTTACGAAG
TCCGAAGCTT GGGTTCAAAA ATCGATAGAA AGAATCTTCG ATCGGATCAC GAAAGGCAGA
ATTATATTTG CGACTTTCGC TTCCAATCTA AGCCGTGTCA AGATGGCAAT GGATTCAGCT
GTCAGACACG GACGCAAAAT CGCTGTCTTT GGTCGATCAA TGGAAACAGC TGTCAATAAT
GGCCGTGATT TGGGTTATTT GAATATTTCC GATGAATTCT TGCTAGAACC CAGTGATCTA
AAAAATACTC CACCCGATGA AACCCTGATC CTTTCAACGG GTTCTCAAGG CGAGCCAATG
GCCGCTTTGG CTAGAATTGC CAACGGGACC CATAAACAAA TAAAGTTGCA ACCGAATGAC
ACAGTCGTTT TCTCTTCAAA TCCAATTCCC GGGAATACTG CTTCGGTTAA TAAAGTAATC
AACGAACTTG AAGAAGGCGG TGCAAATGTT ATTTATGGTC CACTAAACAA TATTCATACT
TCCGGTCATG GTGGACAAGA AGAACAAAAA ATTATGCTCG AACTGATGAA GCCAAAATTC
TTCATGCCGA TTCACGGAGA ATATCGAATG TTAAAGATTC ATAGTGGCTT GGCCCAATCG
ACCGGTGTTC CCAGCGACCA CATTTTCATT ATGGATAACG GTGACGTTCT GGCCTTGGAT
GGCGAACATG CTCATCCAGC CGGTCATTTC TCATCGGAAG ATATTTATGT CGACGGTGGT
GGAATCGGAG ACGTTGGGAA TGCAGTTCTT CATGAAAGAC AAAAACTTTC TCAAGACGGC
TTGGTAATTG TCACAGCAAC AATCAATATG CAGACCAAAG AGATTCTTTC CGGGCCGGAC
CTTCTTAGCC GAGGATTTGT ATATATGCGG GAATCCGTTG ATCTAATCAA CGATGGCCGT
CGAGTTGCCT TTGGAACAAT TAGAAAAGCG ATGATGTCGT CCAACGCCGA CGAAGGGTCG
ATCAGGCAAG CGGTAATCGA TGAATTAAGC CACTATCTTT ACAAGAAAAC GGCCCGTAAA
CCAATCGTTA TACCGGTCTT GATTCAAGTT AAATCTAATT AA
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| Protein sequence | MSEKEQSVNT FAHEVKLENN EVGVMALGGL GEIGKNTYAI QYQDEIVVID AGIMFPEDDL
LGVDYVIPDY TYLVQNIEKV KALVITHGHE DHIGAISYFL RAVNVPVYAP PFALALIKGK
LEEHNLLKKT ELHEIKPDSF LDFGKLSVEF FQTTHSIPDT VGVAVHTPKG TIVETGDFKF
DLTPVTNQYP DMLKMAKIGR EGVLLLMSDS TNAERPEFTK SEAWVQKSIE RIFDRITKGR
IIFATFASNL SRVKMAMDSA VRHGRKIAVF GRSMETAVNN GRDLGYLNIS DEFLLEPSDL
KNTPPDETLI LSTGSQGEPM AALARIANGT HKQIKLQPND TVVFSSNPIP GNTASVNKVI
NELEEGGANV IYGPLNNIHT SGHGGQEEQK IMLELMKPKF FMPIHGEYRM LKIHSGLAQS
TGVPSDHIFI MDNGDVLALD GEHAHPAGHF SSEDIYVDGG GIGDVGNAVL HERQKLSQDG
LVIVTATINM QTKEILSGPD LLSRGFVYMR ESVDLINDGR RVAFGTIRKA MMSSNADEGS
IRQAVIDELS HYLYKKTARK PIVIPVLIQV KSN
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