Gene OEOE_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_1238 
Symbol 
ID4416960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand
Start bp1155581 
End bp1155973 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content33% 
IMG OID639669422 
Producttranscription termination factor 
Protein accessionYP_810779 
Protein GI116491235 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTTTAT CACGTCAACA AATTAGAGAA TTAAGTTTCC AAGCGATTTT TGCTTTGGAA 
ATAAATTCGG ATCAAGACAA GGCTTTACTT AAAAAAGTCT TGTTTAAGCA AAATACTATT
GACGACTATT TTAACGAATT GGTTGATGGT GTTTTTGCAG TACATAAAGA GTTAGAGGAA
AAATACAAAC CTTATCTAAA GGATAATTGG TCACTTGAAC GTATTTCGAA AACTGCCGAT
ATTGCTATGC AGATTGGTCT TTTTGAATTA ACAAGCCGGA TTGATATTCC AAAAAAAGTT
TCTTTGGATC AGGCCACCGA ATTGGCAAAA AATTTTGGTG ATGAGAGTGA TGGGAAATTT
GTTAATGGAG TTTTGGCACA TTTCGTTTCT TAA
 
Protein sequence
MSLSRQQIRE LSFQAIFALE INSDQDKALL KKVLFKQNTI DDYFNELVDG VFAVHKELEE 
KYKPYLKDNW SLERISKTAD IAMQIGLFEL TSRIDIPKKV SLDQATELAK NFGDESDGKF
VNGVLAHFVS