| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1147 |
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| Symbol | |
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| ID | 4416081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | - |
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| Start bp | 1082510 |
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| End bp | 1083826 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639669336 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_810708 |
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| Protein GI | 116491164 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00829243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAAA TGAATTATCA GAATAAAAAA GTATTGGTTT ACGGCTGGGC CCGTTCCGGA
AAGGCTGTTT ATCAGCTTTT AAAAAAAATT GGAGCGAACG TGTATGTAAC AGCCGACGAA
GAACCAACCG ATCTTTTTGA TGATGTTAAT TTTGTTGATG ATATAGATGA AAGTTTTGAT
TTATTGGTTA AAAATCCAGG CATTCGCTAC GAAAAAGAAA TCATTAAAAA AGCTCTGAAT
TTAAATATAC CTGTAATTAC GGAAGTTCAG GTCGCACTTG ATCAGTTCAA AGGAGAAGTC
CTTGCTGTTA CCGGTTCGAA TGGTAAAACG ACTACTACTA CTTTAATTGG GAAAATGCTT
AAAGCCGATA ATGTCGACGT AAAAGTCGGT GGAAATATTG GAATTCCAGT AAGCGAATTA
ATGTTATCCG ACAGTCAGCC AAGAGTTTTG ATGCTTGAAT TATCTAGTTT TCAATTGTTG
GGAGCTCAGA ATATTAAGCC GAAAATAGCC GTTATAACGA ATCTTTTTTC TTCGCATATT
GATTTTCATC ATACTAGGGG AAACTATCTT CGGGCCAAGT TTTCGATCAC TCAGCACCAA
ACAAAGGATG ATTATCTGGT TTTAAACGAT TCTTCGATCG ACTCCAAGGA TTTTGCAAAA
CGTTCTCAGG CAGATGATTA TTACTTTTCT CCGACAAACA CTTCTGTCAA TACATATGTT
AATGATGGAA CAATTTATTT CGATGATGAA AAAATAATCG ACCTTTCGAA GGTTGTTCTG
GTTGGTGAAC ATAATTTGGA AAATATTCTA GCGGCTGTTA CGGCAGCGAA GATATTTGGA
GTTTCAAACC GGGCGATTGA GAAAGTTCTC ACTTCATTTA AAGGTCTTGA ACATCGCTTG
GAAGCGGTCG GAGTAATTAA AGAACGAACT GTTTACAACG ATTCTAAGGC GACCGATATC
GAGGCTACGC AAAAAGCTTT GGCAAGCTTC AAAGAACCGA TCAATTTAAT TGCCGGCGGA
CTTGATCGCG GCGATGATTT GAATCGTTTG GTGCCTAATT TCAAAAATGT TGTCAGTTTG
ATCACTTATG GCCAAACCAA AAATAAATTA CAAAGCGCTG GCGAAAAGGC TGGCATTAAG
CAGACCGTTG TTGTCGATAC TTTAAAGGAG GCTGTTGCCA AGGCAAAAGA GCTTAGCAGG
CCTGGCCAAG TATTGCTTTT CAGCCCAGCT GCTGCCAGTT GGGATCAGTT TCCTAATTTC
GAGATTCGGG GAGAGGAGTT TAAAAAAATG ATCAAAAATC GGGAGGGCTG GTCATGA
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| Protein sequence | MDQMNYQNKK VLVYGWARSG KAVYQLLKKI GANVYVTADE EPTDLFDDVN FVDDIDESFD
LLVKNPGIRY EKEIIKKALN LNIPVITEVQ VALDQFKGEV LAVTGSNGKT TTTTLIGKML
KADNVDVKVG GNIGIPVSEL MLSDSQPRVL MLELSSFQLL GAQNIKPKIA VITNLFSSHI
DFHHTRGNYL RAKFSITQHQ TKDDYLVLND SSIDSKDFAK RSQADDYYFS PTNTSVNTYV
NDGTIYFDDE KIIDLSKVVL VGEHNLENIL AAVTAAKIFG VSNRAIEKVL TSFKGLEHRL
EAVGVIKERT VYNDSKATDI EATQKALASF KEPINLIAGG LDRGDDLNRL VPNFKNVVSL
ITYGQTKNKL QSAGEKAGIK QTVVVDTLKE AVAKAKELSR PGQVLLFSPA AASWDQFPNF
EIRGEEFKKM IKNREGWS
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