Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_1079 |
Symbol | |
ID | 4415147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | - |
Start bp | 1010416 |
End bp | 1011330 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639669273 |
Product | ribosomal large subunit pseudouridine synthase D |
Protein accession | YP_810646 |
Protein GI | 116491102 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA AGCAAATTTT AGAAAGTACA ATCGTCAATC AAAGTGGAAG GTTAGACAAA ATTTTAGCAA CCGATTTTTC TGCTTTTTCT CGAAATCAGA TCAAAAAATT AATTGATCAG GATAGAGTGA TTGTCAACGG AAAGCCTGTT CTTGCAAAGT ATCTTGTTCA AGATGGAGAT CATGTCGTTA TCAAAGTTCC ACCTGTTAAA AAAACCGAAT TGTTGCCTGA AAAAATTCCA CTCGATATTG TCTATGAAGA CGACGACCTT ATTGTTGTAA ATAAGCCTCA GGGAATGGTC GTCCATCCGA GTGCCGGCCA TTCGGAACAT ACACTTGTTA ATGCTCTGCT TAGCCATGCC CCCTTATCGA CCATCAATGG CGAGTTCCGT CCTGGAATTG TCCACCGAAT CGATAAAGAT ACCAGCGGAT TGTTAATGGT AGCTAAAAAT AATTTTGCTC ATGAACATCT GTCGCTTGAT TTGAAATCTC ACAAAACGGG ACGAAAATAC TTAGCAATTG TTCATGGGAA TTTTTCTGAG AAAAGAGGCA CGATTAAAGC ACCAATCGAT CGTGATCCAA AAAATCGTCA AAAGCAGGCC GTCGTCGCTA ACGGCCGGGA AGCAATAACG CACTTTAAGG TTTTGGAAAG TTTTTCAAAT TATTCGTTAA TCGAAGCTGT TTTGGAAACC GGTCGTACCC ATCAAATTCG AGTCCATATG GCTTATATTG GCCATCCGGT CGCTGGCGAT CCTTTATACG GACCCCGAAA AACTTTGCCC GGCAGGGGAC AGTATCTTTT TGCAAGCAGC TTATCTTTGA CACAGCCGCA TACCGGAAAA GAATTAAGTT TTAGTGCGCC TTTACCTGAT TATTTTCAAA AAATGCTTTT AAAATTGCGG AATCTAAATG AGTAA
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Protein sequence | MKNKQILEST IVNQSGRLDK ILATDFSAFS RNQIKKLIDQ DRVIVNGKPV LAKYLVQDGD HVVIKVPPVK KTELLPEKIP LDIVYEDDDL IVVNKPQGMV VHPSAGHSEH TLVNALLSHA PLSTINGEFR PGIVHRIDKD TSGLLMVAKN NFAHEHLSLD LKSHKTGRKY LAIVHGNFSE KRGTIKAPID RDPKNRQKQA VVANGREAIT HFKVLESFSN YSLIEAVLET GRTHQIRVHM AYIGHPVAGD PLYGPRKTLP GRGQYLFASS LSLTQPHTGK ELSFSAPLPD YFQKMLLKLR NLNE
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