| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1044 |
|---|
| Symbol | lacZ |
|---|
| ID | 4415716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 973868 |
|---|
| End bp | 976963 |
|---|
| Gene Length | 3096 bp |
|---|
| Protein Length | 1031 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639669240 |
|---|
| Product | beta-D-galactosidase |
|---|
| Protein accession | YP_810613 |
|---|
| Protein GI | 116491069 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.230358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATA AAATTTCTTT CCGGGACATC ATCAATAGAA AAGATTGGGA AAACCCTGTT
ATAACCAACT GGCATCGTTT ACCGATCCAT ACCGAAATGA ATTACTCTAA AAGCCTTAAT
GAGGACAAGC AAAAAACGAT CCAGTCTCTT AATGGAAATT GGTGTTTCAG TTATTTTTCT
AAAGTTACCG ATGTTCCTGA AAATTGGGCA GATCGAGATT TAACAAAAAG CAACATAATG
CCGGTGCCAT CGAATTGGCA ATTGCATGGT TACGATCAAC CGATTTACTC GAATGTTGCC
TACCCTTTTC CAGCTAATCC ACCTTATTTG CCAGAGGAAA ATCCAACGGC TTGTTACAGT
CGTATTTTCC AACTAAATGA TGACTGGCTT CAATCAGGCC AAAATCATGT AATTTTTAAT
GGTGTGGGTT CAGCTTTTCA TCTGTGGTTG AATGGCCAAT GGATCGGTTA CTCGGAAGAT
AGTCGTTTAC CAGCCGAATT CGATTTAACA AAATATTTAA AATCAGGTAA AAATCGAATT
TCAGTGATGG TTCTCCGCTG GAGCAAAGGC AGTTACTTTG AAGATCAGGA CATGTGGCGG
ATGTCGGGAA TTTTCCGCGA TGTCGAAGTT AAACATCTGC CGGCAACATA TTTGCAGGAC
TATCAGCTTC AAACCGATTT AGACGATGAT CTTGATCAAG CAAAAATTAC AATCAAAGCA
CAAGTTGCCG GCAAAAATTT TTCACAGAAC AAATTACGAA CCCGACTATA TTTTGCCAAT
GAAAAAGTTG CCGACCAAAG CAGCAGATTG TCAACAAGGG CAGTTGACGA ACGGGGGCCT
TTAGACAACC AATTTATTGC CGAATTAAAT TTAAAAGATC CATATTTGTG GTCGGCCGAA
CTCCCTTATC TTTATCAGCT TGTCATCGAA TTGCTTACAG ATGACGGTGA TATACTACAA
GTTGAAAAAG TAAATATCGG TGTCCGAAAA GTTGAGATCA AAAATGGCCT CTTAAAACTA
AATGGAAAGC CTTTGTTGAT TAGAGGAACC AATAAACACG AATTTGATTC CAAGAAAGGT
TATGCCGTCG ATGAAGAGAC CATGATTCAG GACATTAAAG CCATGAAGCG AAATAACTTT
AATGCTGTCA GATGCTCGCA TTATCCTAAT AATCGTCGAT GGTATGAACT TTGTGATCAG
TATGGCCTTT ATGTTGTCGA CGAAGCGAAT ATCGAGACCC ACGGAATGGT GCCAATGAAT
CGTTTGACAA ATGATCCGGT GTACTTGCCT TTAATGTCGG ATCGTGTGAC GAGAATGGTT
ACACGCGATC GCAATCATCC ATCAATTATA ATTTGGTCTT TAGGCAATGA ATCCGGATAC
GGCCGCAACC ATGCCGCTTT ATACAACTGG ATCAAACAAA GTGATCTGAG TCGGCCGGTA
CAATATGAAG GAGGCGGCGC CAATACAGCA GTTACTGACA TTATTGTTCC AATGTATGCT
CGTGTTGAGC AAGATCAAAT AGAATCAGTT AATTCAAAAT GGTCTTTAAA GAAGTGGATT
GGTCTTCCCG GAGAAACGCG CCCGCTAATT CTTTGCGAAT ATGCCCACGA TATGGGCAAC
AGTTTGGGTG GCTTCGGCAA ATATTGGCAA GCCTTTCATA AGTATCCACG ATTACAGGGA
GGTTTTATTT GGGATTGGGT CGACCAGGGA CTTTTGAAGA AAGATGTAAA CGGTAATGAC
TTTTATGCCT ATGGAGGCGA CTTTAAAGAT CAACCAAATG ATCGTCAATT CTGTTTGGAC
GGTTTGCTTT TTCCCGATCG AACACCGAAG CCGGCGATGC ATGAAGTCAA ATATTGGCAA
CAATATTATT TGTTTAATTT GCAGCGAAAC CCACTTGGAC AGGCTGAAAG TTTCACTGTC
ACCAATGATT ATTCTTTTAA AAAGAGCAGT AATGAACGAT TACATTACCA GATTAAAAGC
GAAAACGAAA TCGTTATTGA TAAATATATT GATCTAGTGC TTAATCCCGG TGAATCTTTA
TTAATAAAAT TACCGAAGGG TCGATCTTCG ACCAGTTCTT TGCTTGATAT AGATATCTCT
CTTATCAAGG GAAACTCTTG GGCTCCAAGC GGCTTTAAAA TTGCCAGTGA ACAATATGTT
TTAGCAAAAA AGTTTGGGCC AACTAACGCC GTCACGGCAG CAACGAATAA GATTTCTTTA
ATCGAAAACA AAGATACCAA CACTTTTGAA ATCAAATTGG ACGATCAAAA GTGGCAGTTT
GCTAAAAATT CCGGTTTGTT AGTGAGTTGG TCCAAATCAG GCAATGAGAA TTTATTGGAC
GCGTTACGTG ATCAATTTAC ACGTGCACCG CTTGATAACG ACATTGGTGT TAGTAAAGTC
GACCATATCG ATCCAAATGC ATGGTATGAA CGTTGGAAAT CCGCAGGAAT GTATAATCTA
AAAACCAATC TTGTTTCAAT TGATGCCGAA CAACTCGAAC GAGCTGTTCT TATTCGAACA
GAACACAGTT ATTCAAATCA TTTCCAGATT CTTTTCAAGA GTTCGAAAAT TTATCGAATT
GATGCTAACG GGACGATGAC CGTTACAGTC GATGTTTCAC TGGCTCAGGG AATTCCGTTC
CCTGCAAGAA TAGGTTTAAC TTGTCACTTA GCTGACCAAA TAACTGATGT TTCATACACG
GGACTGGGCC CATTTGAAAA TTATCCCGAT CGTCAATCGG CGGCTCAATA CGGCCATTGG
CAAATGGAAT TGGATGATCT TTACACGCCT TATATATTTC CAAGTGAAAA CGGTTCACGT
GGTCAAGTTA GTCAATTGGA ATTTGGCAAG CAAAAAATTT CAGCGTATCA TGAGCAAAAC
TTTTCTTTCA ATTTGAGTCG TTTTAGTAAG CAGCAATTAG CCAGGATTTC ACATCGAAAT
CTTTTACAAG CAGAAAATGG TGTCTGGCTG TCGATTGATG GCTATCGTAT GGGAGTTGGC
GGAGACGATT CCTGGAGCCC AAGCGTCGCT CCCGAATATT TACTCTCGAA TAATTATTAT
CATTATGCTT TCCAATGGTG CAGAAAAGAT ATCTGA
|
|---|
| Protein sequence | MTNKISFRDI INRKDWENPV ITNWHRLPIH TEMNYSKSLN EDKQKTIQSL NGNWCFSYFS
KVTDVPENWA DRDLTKSNIM PVPSNWQLHG YDQPIYSNVA YPFPANPPYL PEENPTACYS
RIFQLNDDWL QSGQNHVIFN GVGSAFHLWL NGQWIGYSED SRLPAEFDLT KYLKSGKNRI
SVMVLRWSKG SYFEDQDMWR MSGIFRDVEV KHLPATYLQD YQLQTDLDDD LDQAKITIKA
QVAGKNFSQN KLRTRLYFAN EKVADQSSRL STRAVDERGP LDNQFIAELN LKDPYLWSAE
LPYLYQLVIE LLTDDGDILQ VEKVNIGVRK VEIKNGLLKL NGKPLLIRGT NKHEFDSKKG
YAVDEETMIQ DIKAMKRNNF NAVRCSHYPN NRRWYELCDQ YGLYVVDEAN IETHGMVPMN
RLTNDPVYLP LMSDRVTRMV TRDRNHPSII IWSLGNESGY GRNHAALYNW IKQSDLSRPV
QYEGGGANTA VTDIIVPMYA RVEQDQIESV NSKWSLKKWI GLPGETRPLI LCEYAHDMGN
SLGGFGKYWQ AFHKYPRLQG GFIWDWVDQG LLKKDVNGND FYAYGGDFKD QPNDRQFCLD
GLLFPDRTPK PAMHEVKYWQ QYYLFNLQRN PLGQAESFTV TNDYSFKKSS NERLHYQIKS
ENEIVIDKYI DLVLNPGESL LIKLPKGRSS TSSLLDIDIS LIKGNSWAPS GFKIASEQYV
LAKKFGPTNA VTAATNKISL IENKDTNTFE IKLDDQKWQF AKNSGLLVSW SKSGNENLLD
ALRDQFTRAP LDNDIGVSKV DHIDPNAWYE RWKSAGMYNL KTNLVSIDAE QLERAVLIRT
EHSYSNHFQI LFKSSKIYRI DANGTMTVTV DVSLAQGIPF PARIGLTCHL ADQITDVSYT
GLGPFENYPD RQSAAQYGHW QMELDDLYTP YIFPSENGSR GQVSQLEFGK QKISAYHEQN
FSFNLSRFSK QQLARISHRN LLQAENGVWL SIDGYRMGVG GDDSWSPSVA PEYLLSNNYY
HYAFQWCRKD I
|
|---|
| |