| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1023 |
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| Symbol | |
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| ID | 4415660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 956198 |
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| End bp | 957121 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639669224 |
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| Product | tyrosine recombinase XerC subunit |
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| Protein accession | YP_810597 |
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| Protein GI | 116491053 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.554982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCAGA TTACTTCAAC AATGAAGAAG TATGAAGAAT ATCTGCAAGC AGAACGCCAA
TACTCTACTC TGACTCTCAA AGCTTATCGC GAAGATATAG GCGAATTTGT TAATTTCTTT
TCTCAGAATG GCGGATTCAA GGATTTTTCG GCTATTGATC GATTTGATGT CCGGATTTAT
TTGAATAATT TATACGAAAG GAAATTAGCT AAAACATCTA TAGCACGAAA AATATCAAGT
TTAAGAAGTT TTTATCATTT TTTGATCGAA AACAGTTTGG CCAAAAAAAA TCCATTTGCA
AACATTGAAT TTCGTTCTAG CAACAAGAAG TTGCCAGAAT TTTTATATCC AGCGGAAGTT
ATCGAATACC TCAGAGCAGC AGCCGACCCG CAAAATGATC AGTATCTTAG GAACTCTGCC
TTAATAGAGT TACTATATGC GACTGGGATG AGAATATTTG AAATTACAAA TTTGACTTTT
TCTCAAATAG ATTTTAATAG CCAAATCGTT GACATTACAG GAAAAGGGAA GAAACAAAGA
ATCATTCCTT TTGGAAAACC AGCCCTGGCG TCTCTAAAAC AATATCTTCC CTGGCGTGAG
AAGACAATGC AGAAATTTTC GGAAAAGCAC TCCTATATTT TTATAAATAC CCGTGGCAGA
CAATTAACTG AAACCGGTGC CGAGTATATT TTAAAACAGG TATCAAAAAG GTCTAAACTA
ACCGCCAACA TTCATCCTCA TATGCTTAGG CACTCCTTTG CAACCCATTT ATTGAATAAC
GGTGCCGATA TCAGAACCGT CCAAGAACTG CTGGGCCATG CAAGTTTATC GACAACGCAA
ATATACACGC ATATCACGAC TGAAAATCTC CAGGAAAACT ACAAAAAATT CTTTGATCGG
GCTAAAATTA GACATGATGA ATGA
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| Protein sequence | MNQITSTMKK YEEYLQAERQ YSTLTLKAYR EDIGEFVNFF SQNGGFKDFS AIDRFDVRIY
LNNLYERKLA KTSIARKISS LRSFYHFLIE NSLAKKNPFA NIEFRSSNKK LPEFLYPAEV
IEYLRAAADP QNDQYLRNSA LIELLYATGM RIFEITNLTF SQIDFNSQIV DITGKGKKQR
IIPFGKPALA SLKQYLPWRE KTMQKFSEKH SYIFINTRGR QLTETGAEYI LKQVSKRSKL
TANIHPHMLR HSFATHLLNN GADIRTVQEL LGHASLSTTQ IYTHITTENL QENYKKFFDR
AKIRHDE
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