Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_1023 |
Symbol | |
ID | 4415660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 956198 |
End bp | 957121 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639669224 |
Product | tyrosine recombinase XerC subunit |
Protein accession | YP_810597 |
Protein GI | 116491053 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.554982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAGA TTACTTCAAC AATGAAGAAG TATGAAGAAT ATCTGCAAGC AGAACGCCAA TACTCTACTC TGACTCTCAA AGCTTATCGC GAAGATATAG GCGAATTTGT TAATTTCTTT TCTCAGAATG GCGGATTCAA GGATTTTTCG GCTATTGATC GATTTGATGT CCGGATTTAT TTGAATAATT TATACGAAAG GAAATTAGCT AAAACATCTA TAGCACGAAA AATATCAAGT TTAAGAAGTT TTTATCATTT TTTGATCGAA AACAGTTTGG CCAAAAAAAA TCCATTTGCA AACATTGAAT TTCGTTCTAG CAACAAGAAG TTGCCAGAAT TTTTATATCC AGCGGAAGTT ATCGAATACC TCAGAGCAGC AGCCGACCCG CAAAATGATC AGTATCTTAG GAACTCTGCC TTAATAGAGT TACTATATGC GACTGGGATG AGAATATTTG AAATTACAAA TTTGACTTTT TCTCAAATAG ATTTTAATAG CCAAATCGTT GACATTACAG GAAAAGGGAA GAAACAAAGA ATCATTCCTT TTGGAAAACC AGCCCTGGCG TCTCTAAAAC AATATCTTCC CTGGCGTGAG AAGACAATGC AGAAATTTTC GGAAAAGCAC TCCTATATTT TTATAAATAC CCGTGGCAGA CAATTAACTG AAACCGGTGC CGAGTATATT TTAAAACAGG TATCAAAAAG GTCTAAACTA ACCGCCAACA TTCATCCTCA TATGCTTAGG CACTCCTTTG CAACCCATTT ATTGAATAAC GGTGCCGATA TCAGAACCGT CCAAGAACTG CTGGGCCATG CAAGTTTATC GACAACGCAA ATATACACGC ATATCACGAC TGAAAATCTC CAGGAAAACT ACAAAAAATT CTTTGATCGG GCTAAAATTA GACATGATGA ATGA
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Protein sequence | MNQITSTMKK YEEYLQAERQ YSTLTLKAYR EDIGEFVNFF SQNGGFKDFS AIDRFDVRIY LNNLYERKLA KTSIARKISS LRSFYHFLIE NSLAKKNPFA NIEFRSSNKK LPEFLYPAEV IEYLRAAADP QNDQYLRNSA LIELLYATGM RIFEITNLTF SQIDFNSQIV DITGKGKKQR IIPFGKPALA SLKQYLPWRE KTMQKFSEKH SYIFINTRGR QLTETGAEYI LKQVSKRSKL TANIHPHMLR HSFATHLLNN GADIRTVQEL LGHASLSTTQ IYTHITTENL QENYKKFFDR AKIRHDE
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