| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1013 |
|---|
| Symbol | |
|---|
| ID | 4415650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 948223 |
|---|
| End bp | 948735 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639669214 |
|---|
| Product | dihydrofolate reductase |
|---|
| Protein accession | YP_810587 |
|---|
| Protein GI | 116491043 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.556231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACAT CAATATGGGC ACAATCAAAA AATAATGTGA TTGGCAGAAA CAATCACTTG
CCATGGTCCC TACCGGATGA TCTTAAATTT TTTCGCCAGG AAACTAAAAA TAAGGCAGTG
GTAATGGGTC GAAAAACCTA TGAGTCTTTT GGTTCAAAAG CATTGCCAAA ACGTTTAAAC
ATTATTTTAA CTTCCAATAT GGATTTTAAG AGCAACGATC CGGAGGTAAA AATCGTGCAT
TCTCCAATCG AGGCTGTCAA TACAGCAAAA GAACAGCATT TACCCCTTTA TGTAATAGGA
GGAGCCAGCG TTTACGAAAG TTTTATGAAT ATGGCTGATC GGTTATTGAT TACTTTGGTT
GATGCTAATA TTAAGGGAGA CACATTTGCA CCAAATTTTA GTGAAAAGTC TTTTAGTTTA
GTTTCCCAAT GTCATCATGC TCAAGATAAG AAACACGCTT ATTCTTTTGA TTTTCTGACT
TATGAGAGGA AAAATAAAAG CGATCAAGTA TAA
|
|---|
| Protein sequence | MITSIWAQSK NNVIGRNNHL PWSLPDDLKF FRQETKNKAV VMGRKTYESF GSKALPKRLN
IILTSNMDFK SNDPEVKIVH SPIEAVNTAK EQHLPLYVIG GASVYESFMN MADRLLITLV
DANIKGDTFA PNFSEKSFSL VSQCHHAQDK KHAYSFDFLT YERKNKSDQV
|
|---|
| |