| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1003 |
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| Symbol | |
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| ID | 4415675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 938639 |
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| End bp | 939547 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639669204 |
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| Product | tyrosine recombinase XerD subunit |
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| Protein accession | YP_810577 |
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| Protein GI | 116491033 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.497558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAACTA AAAAAAATCA ATTCGAAAAT GTTTTATTGG ATTATACGAG GTATTTACGG
ACGGAACAAG GCTTGCTGGA GAACTCAATT AAAAGTTATA AACAAGATTT ATCGGAATTC
GGAGCCTATA TTCAAAAAGA AAATATCCTT CTGGTTAAAG TTGACCGTTT TACAATTCTG
GATTGGCTTA ACTATTTGCA AAATTCCGGT AAATCAAATA ATTCAATTGT ACATATGGTC
AGTTCTTTAC GAAAATTTTT TGCTTATCTT AGCGATGATC AGCAAATTCA AATTGATCCA
ATGCTGAAAG TGACTACACC AAAGAAGAAT TCTCATTTGC CACAAGTTTT AACGGCCACA
GAAATTGAAG CTGTTTTAGC GGTACCTGAT ATTTCGACAA CTCTTGGATT AAGGAACCGG
GCTTTGCTAG AAACAATGTA CGCAACCGGA TTTCGCGTGT CTGAAATATG TAATTTGAAA
TTAGCTGATC TTCATGACGA ATTGGGCTTA ATCACTACCA TTGGTAAAGG GCAAAAACAG
CGAATTGTTC CGATCGGTGA AATGTCTTTA CTCTATATCT CTAAATATTT TAAAGAATCA
AGGCCGATTT TGCTCAAAGA CAAAGAAAGC CCGTATTTAT TCCTTAATGA TCATGGCCAT
CGGATATCTA GACAGGGAAT TTTTAAGCTT GTGAAGGAAA TTGCCATTAA AGCCGGCATT
GATAAAGATA TTAGTCCTCA TACTCTGCGC CATTCTTTTG CAACCAATTT ATTGGAGAAT
GGTGCCGATT TAAGAATTGT TCAAGAATTA TTAGGTCATT CCGATATCAG TACAACTCAA
ATATACACAC ATGTTAGTCA AAAACATATA AGAGAACAAT ATAACAGATT TCATCCTCGG
GCAAAATAA
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| Protein sequence | MLTKKNQFEN VLLDYTRYLR TEQGLLENSI KSYKQDLSEF GAYIQKENIL LVKVDRFTIL
DWLNYLQNSG KSNNSIVHMV SSLRKFFAYL SDDQQIQIDP MLKVTTPKKN SHLPQVLTAT
EIEAVLAVPD ISTTLGLRNR ALLETMYATG FRVSEICNLK LADLHDELGL ITTIGKGQKQ
RIVPIGEMSL LYISKYFKES RPILLKDKES PYLFLNDHGH RISRQGIFKL VKEIAIKAGI
DKDISPHTLR HSFATNLLEN GADLRIVQEL LGHSDISTTQ IYTHVSQKHI REQYNRFHPR
AK
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