| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0942 |
|---|
| Symbol | |
|---|
| ID | 4415305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 882678 |
|---|
| End bp | 883535 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639669144 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_810519 |
|---|
| Protein GI | 116490975 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA AAATTGCCAT CTTAATTGAT TCATGTTCTG ATGCACCACA ATATTTACAG
GACAAAGATT ATGTTAAAAC CGTTTCGATG CAAATTCATT GGGATGGAAA AGTTCTTAGA
GATAGAGTAG ACATTAGTCC TGATCAGTTT TATCGGAAAA TTAAACACGG CGCAAGTATT
CCAACTACTT CAAGCCCGCA AAGCGGAGAT ATTCTTGAAA AATTCCAGGA ACTGGAAAAA
GAAGGTTATA GCGATGTTAT TGCGATCTGT ATTTCAAGTG GATTGTCAAC AACTTATAAT
CAAATAAGTT TGTTGGCCAG TCAACAGAGC AACTTGAATA TCAAAGTGAT TGATACAAAA
AATATCGGTA TCGGCAGCGG ACTATTTGCA GTTTATGCCG ACGACTTAAT AAAAAAAGAG
CTTCCCTTTT CAAAAATTGT GCAATTAGTT GAAGAATCAG TCGACAGCGG TAAAATCTTC
TTTTATATTC CAACGCTGAA ATATTTGGCG GCCGGCGGCC GGATTGGTAA AGTCGCAAGT
ATTCTCGGAT CGGCTCTGGA TATTAAGCCA ATTATTTCCT GCAACGACGA GGGTGTTTAT
TACACAGTAA CCAAAGCACG CGGCGAAAAA AAAGCAATCG AAAAAATGCT GGCATTAGTT
GAAAAAACTG CTAATTTAGA AAAAAGAGTT AGAATTGCTG TTGCCGAAGG TGATAATATG
ACTCTTTTGA AATATGTCTG CCAGAAATTG GAAAAAATTT ATCCAAATCA GCAAATCTAT
ACAGGAAATA TTTCACCTGC TCTAGGAGTC CACACCGGGC CAGGATTAAT CGGTATCGCA
GTTCACATCG AAAAATAG
|
|---|
| Protein sequence | MTEKIAILID SCSDAPQYLQ DKDYVKTVSM QIHWDGKVLR DRVDISPDQF YRKIKHGASI
PTTSSPQSGD ILEKFQELEK EGYSDVIAIC ISSGLSTTYN QISLLASQQS NLNIKVIDTK
NIGIGSGLFA VYADDLIKKE LPFSKIVQLV EESVDSGKIF FYIPTLKYLA AGGRIGKVAS
ILGSALDIKP IISCNDEGVY YTVTKARGEK KAIEKMLALV EKTANLEKRV RIAVAEGDNM
TLLKYVCQKL EKIYPNQQIY TGNISPALGV HTGPGLIGIA VHIEK
|
|---|
| |