| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0885 |
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| Symbol | |
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| ID | 4415176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 824429 |
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| End bp | 825172 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639669090 |
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| Product | response regulator |
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| Protein accession | YP_810468 |
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| Protein GI | 116490924 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0355946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTT TAGTCGTGGA TGATGAACCT TTGGCTCGTG ACGAATTAAG TTATTTGCTA
AAACAGAATC GATTAACCGA TTCTGTTTAT CAGGCTGATT CCATCGGAAC GGCAGTTGAT
AAATTGCTGC AGGAAAAAAT CGATGTCATT TTTATCGATA TATCATTAAA TGATGAAAAT
GGTTTTCAAT TAGCAAATGA ATTAAAAAAA CTTATTCATC CACCATTGAT TGTTTTTGCA
ACTGCTTTTG ATAGCTATGC TGTCAAAGCT TTTGATGTCG ATGCAGTCGA TTACGTTCTC
AAACCCTTTG AACAGTCTCG AGTTAATCAG GCTTTGGAGA AAGTTCAGGC AATTTTTAAG
CTTCAAGCAA AAAAAGACAA TTCGTTGACT GTAAATTCCC ATTTCGGGTC GGAGAAAACG
AAAATTATAT CGATTACCAG TGATGATAAA ACGAAAATTA TCAAACAACA CGATTTAATT
ATGGCGACTA TTAAGGATGG GGCTTTGACT TTAATTACAA ACGGTCAATC ATACAGTACC
CGTCAATCTC TTGGTTGGTT GCTTAGTCGT CTTAACAAAA ATGATTTTCT GCAGGTCCAC
AGAAGTATCA TTGTAAATAT AAATTCTATC TCGGAGCTTG AACCTTGGTT TAATCATACC
TACCAATTAA AATTAACGAA TGGTATGAAG GTTCCGGTTA GTCGTTCTTT TATAAAGGCA
GTTAAAAAAA GATTGATGAT GTGA
|
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| Protein sequence | MKILVVDDEP LARDELSYLL KQNRLTDSVY QADSIGTAVD KLLQEKIDVI FIDISLNDEN
GFQLANELKK LIHPPLIVFA TAFDSYAVKA FDVDAVDYVL KPFEQSRVNQ ALEKVQAIFK
LQAKKDNSLT VNSHFGSEKT KIISITSDDK TKIIKQHDLI MATIKDGALT LITNGQSYST
RQSLGWLLSR LNKNDFLQVH RSIIVNINSI SELEPWFNHT YQLKLTNGMK VPVSRSFIKA
VKKRLMM
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