| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0801 |
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| Symbol | trmD |
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| ID | 4415861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 748870 |
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| End bp | 749619 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639669012 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_810392 |
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| Protein GI | 116490848 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATTG ATGTTTTAAG TATTTTTCCG GACATGTTTG ATCCTTTACG CCAATCAATG
ATCGGCAAAG CGATTGAAAA AGGCTTAATT GATTTTAAAG TAACCGATTT TCGCGAATTT
ACGACCAATA AGCAAAGACA CGTTGATGAC GTCGTTTATG GCGGAGGAGC CGGAATGCTC
TTAATGCCTC AACCGATTTT TGATGCGATG GAGGAAGTTA AAAAAGAGAA TAATGGCGAT
AAGGGTCATG TGATTCTCGT CGATCCGGCT GGTCGGAAAT TTGACCATCA TGTGGCAAAA
AAATTGTCCA CATATAATCA TTTAACTTTT ATTTCCGGAC ACTATGAAGG CTATGATAAT
CGAATCCGCA ATTTGGTCGA TGAAGAGATT AGCCTGGGTG ATTATGTTTT AACCGGCGGG
GAATTAGCAA GTATGGTGAT TATTGATGCA ACCGTTCGTT TTTTGGATAA TGTTTTGGGA
AATTCCGAAT CGGCAGCAGA CGATAGTTTT CAAAACGGTT TATTAGAAGA GCCTCAATAT
ACTCGCCCGG CAAATTTTCG CGGAATACAG GTTCCGGAGG TTTTAACTAA CGGAGATCAT
GAAAAGATTC GTAAATGGCG TTTAAAGGAG TCTTTGCGGA AAACCTTCTT GCGACGTCCG
GACTTATTAG AGAAAAGAAG TTTCAATAAA GAAGAACTTG ATTTTCTCGA TGACATAAAA
TATGAAGAAT CACTTGATTC TGATCAGTGA
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| Protein sequence | MKIDVLSIFP DMFDPLRQSM IGKAIEKGLI DFKVTDFREF TTNKQRHVDD VVYGGGAGML
LMPQPIFDAM EEVKKENNGD KGHVILVDPA GRKFDHHVAK KLSTYNHLTF ISGHYEGYDN
RIRNLVDEEI SLGDYVLTGG ELASMVIIDA TVRFLDNVLG NSESAADDSF QNGLLEEPQY
TRPANFRGIQ VPEVLTNGDH EKIRKWRLKE SLRKTFLRRP DLLEKRSFNK EELDFLDDIK
YEESLDSDQ
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