| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0793 |
|---|
| Symbol | |
|---|
| ID | 4415853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 743290 |
|---|
| End bp | 744138 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639669004 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_810384 |
|---|
| Protein GI | 116490840 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.313892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAATTAA CCATTGATGG CAATTTGTTT AGAAACAGAA GAAAAGAACT AAAAATGACT
CAGGTGGAGC TTGCATCGAA CCTAACTTCT CAAACAGTTG TTTGTTCTTT AGAACACGGC
GTGATACCTA AATTAGAAGT TTTGGCGGAA ATAATGCAGC GTTTGTCTTT ATCCCTTGAG
GATGTTTTTC CTAATAGTCC CTTTTGTTTA AGTAAACTTG ATGAATTGAA AATCAAGTTA
GATAACGAGA ATTATCGACA GGTTTGGTCG GGATTAGAAA AGATTAAAAA AACAGCTTTG
GTATCTTCGG TAGAAAAACA GAAATTTTAT TATTTATCGG CATCCTCGGC TTTTCATGAT
GGTCGAATTG AAGATGCCGA TTTTGCTTGT TATGAATTGC TTGGTTTTTC CGAAAAAGAA
AAATTGTGGT TTTTTGACGC TCTGGCCAAT ACGATTAAAG CGCAAATTTG GCAACTTAAG
GAAGATTATT CAAAGGCGGA AAATTGTTTT AAAAGAGTAA TCAAGATTTT AAATGATTAT
CCTTACGAGA AAGAGACAGT TCCTTCGATG ATTAGCTATA TTAGAATTTA TCAAGCCCTT
GCGGAGCATT TTTTGCTGCT TGAAAATTTT AAGCGTGCCG CTTCTTATAT TGACAAGGCC
TTAAAAATAT TATCTGAAGA AAAATCCACT TGGCACCTTG GTGAATTGCT GTTGCTTAAA
TCGAAAATTG CTGACGAGAG TGGTTTAAAT GAACAAAAAG AAAAATTGAT TTTAACGGCC
GAACAACTAT ATGAGTTTGG TAAGAGCCCT CAACTAGGTC GAATGCTCAA TAAAAGCAAG
TCCAATTAA
|
|---|
| Protein sequence | MKLTIDGNLF RNRRKELKMT QVELASNLTS QTVVCSLEHG VIPKLEVLAE IMQRLSLSLE
DVFPNSPFCL SKLDELKIKL DNENYRQVWS GLEKIKKTAL VSSVEKQKFY YLSASSAFHD
GRIEDADFAC YELLGFSEKE KLWFFDALAN TIKAQIWQLK EDYSKAENCF KRVIKILNDY
PYEKETVPSM ISYIRIYQAL AEHFLLLENF KRAASYIDKA LKILSEEKST WHLGELLLLK
SKIADESGLN EQKEKLILTA EQLYEFGKSP QLGRMLNKSK SN
|
|---|
| |