| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0787 |
|---|
| Symbol | |
|---|
| ID | 4416841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 736876 |
|---|
| End bp | 737826 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639668998 |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_810378 |
|---|
| Protein GI | 116490834 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATT CAGTGATATT TTTTGGGACT TCTGATTTCA GTAGAGCTGT TTTGCAGGGA
TTGATTGCCG ATGATGATTT TGAAGTAATC GCCGTTGTCA GCCAGCCGGA TCGTCCGGTT
GGCCGAAAAA AACTTTTGCA GCCTACAAAA ATCAAACAAT TGGCTTTAGA GTATCGAATC
CCGATTTTTC AACCGGAAAA ACTTTCCCGA TCAGAAGAAA TGGATCGACT GATTTCTATG
CAGGCCGATT TTTTGGTGAC AGCGGCTTTC GGCCAATTTG TCCCCTCTAA ATTATTGAAA
TCCGCTAAAA TTGCCTCGAT TAATGTTCAT GCCAGTCTGC TGCCAAAATA TCGCGGGGCT
GCGCCGATTA ATTGGGCCTT GATTAACGGT GACAAAGAGA CCGGCGTTTC AATTATGTAT
ATGGTAAAGG AAATGGATGC TGGCGATATT ATCAGTGTTA AAAAAATGCC GATTAAAGAA
AACGATAATG CCGGTTCTTT GTTTGAAAAG CTGGCGGTTG TCGGTCGTGA TCTGCTCTTA
AAAACGATGC CAAAAATGGT TAGCGGCGAT ATTTCTCCAA TTCAGCAGGA CGAAGAAAAA
ATCACTTTGG CACCAAAAAT CGATTATAAG TTGACTGAGC TGGATTTTTA TCATCAGAAA
GCTGAAAAAA TTGTTGATTT AATTCGCGGC CTATCACCGA AACCGGGAGC CAGCCTCCAA
ATTGCCGATG AGAAAATTAA GGTTTTTAAA GCAAAAATCG GACCCTGTCA AGGTGAAGTT
GGTTCGATTG CAATTAAATC CAAACACGAT CTTGCAATCA CGGCAGCTGA CGGCCGAACG
GTTTTTTTGC AGAAAATTCA ACCGATTGGT AAAAAAATAA TGGATGTTTC TTCCTTTTTG
AATGGCGCCG GGCAAAAGCT TCATGTCGGT AACATGGCAA ATAGGATATA A
|
|---|
| Protein sequence | MTNSVIFFGT SDFSRAVLQG LIADDDFEVI AVVSQPDRPV GRKKLLQPTK IKQLALEYRI
PIFQPEKLSR SEEMDRLISM QADFLVTAAF GQFVPSKLLK SAKIASINVH ASLLPKYRGA
APINWALING DKETGVSIMY MVKEMDAGDI ISVKKMPIKE NDNAGSLFEK LAVVGRDLLL
KTMPKMVSGD ISPIQQDEEK ITLAPKIDYK LTELDFYHQK AEKIVDLIRG LSPKPGASLQ
IADEKIKVFK AKIGPCQGEV GSIAIKSKHD LAITAADGRT VFLQKIQPIG KKIMDVSSFL
NGAGQKLHVG NMANRI
|
|---|
| |