| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0769 |
|---|
| Symbol | |
|---|
| ID | 4416536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 717809 |
|---|
| End bp | 719470 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639668980 |
|---|
| Product | formate-tetrahydrofolate ligase |
|---|
| Protein accession | YP_810361 |
|---|
| Protein GI | 116490817 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2759] Formyltetrahydrofolate synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.115435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAG ATATTGAAAT TGATCATAGT ATCAAAGCGC TTCCGATTAC AGAAATTGGC
AAGCAGATTG GTTTATCGGA TTCTCAACTG ATACCTTATG GGCATGATAA GGCAAAAATT
GATGCGTACA GCATTGCAAA TATGCCCCGG CAGGGTAAAT TGGTTCTTGT CACGTCAATT
AATCCAACTC CCGCCGGCGA AGGAAAAACA ACTGTCACAA TCGGTCTGGT CGATGCGATT
AATCGTTTGG GAAAATCTGC GATTGGTGCT CTTCGGGAAC CTTCGATGGG GCCGGTTTTT
GGTCTCAAAG GCGGTGCGAC CGGCGGCGGT TATGCCCAGG TTATTCCAAT GGAAGATATT
AATTTGCATT TTACCGGCGA TATACATGCT GTCTCGGCAG CTCATAATCT GCTTGCAGCT
GTGATCGATA ATCATTTACA TCAGGGGAAT GAATTAAAAA TCGATCCTGA AAATATTTAT
TGGCGCCGGG TACTCGATAT GAATGATCGC GCTCTTCGCC AAATTACCCT TGGAAAAGGT
CGAGTTAATG GTCCGGAACG AAATTCCGGC TTTGATATTA CTGCCAGTTC TGAAATTATG
GCTGTTTTGA CTCTTTCAAA GAATCTTTTT GATTTGAAAA AACGTTTGAG CCGAATCGTA
GTAGCCTTGG ATGTCCAGGG AAAGCCGGTT ACAGTTGCAG ATCTAAAAGT GGCTGGCGCG
TTAACTGCGA TCCTAAAGGA TGCGATTAAC CCGAATCTGG TTCAATCGCT AGAACATTCT
CCTTTTATTA TTCATGGCGG ACCTTTTGCG AACATTGCCC AAGGAACTAA TTCAGTTGTT
GCAACGGATG CTGCTCTCAA GCTGGCTGAT TTTGCCGTGA CGGAAGCAGG TTTTGGTTCA
GACCTTGGCG GGGAAAAGTT CATGGATGTT AAAGTTCCTG TTTTGGGTAA AGAACCTGAT
GCTGTCGTAA TTGTTGCCAC CGTTAAGGCT CTGAAGTTTC ATGGTGGGGT GGCGCTCGAT
CATTTGTCGG ATAAGAATGT CGATGCTGTT AGAAACGGAT TGGATAATTT GAATAGGCAT
TTAGAAGCGA TGACACATTA CGGCAAACCG GTTGTTGTTG CTTTGAACAA ATTCCTTGAT
GACGATATGG AAGAAATTCA GCTGATCAAG AATTTCGTTG AAGGTGAAAA GAAACTACAA
TTTGAGATTG TCACTAGTTT TGTTGATGGG TTTGAAGGGT CTTTGGATTT AGCCAAAAAG
GTTATTGAAG CGACCGACAA TCAACGATTC TTTATGCCAC TTTATCAGGC CGATGATTCC
ATTGAAAATA AAATTCAAAC AATTGTCGAA AAGATATATG GCGGCAAGGA TTTCGAATTA
TCTGATCGTG CTAAAAAAGA CTTAGCCGAA GTCAAAGAAA ACGGCTGGGG CAAGTTACCT
GTTGTGATCG CCAAAACGCC CAACAGCCTG ACCGATGATA GCAAGATTCA TGGCGCACCG
ACTGGCTTCA CGATCCATAT TCGCCGCTTT ATTCCGAAAA TCGGCGCTGG TTTTATTGTT
GCGATGGCAG GCAAAGTTTT GATGATGCCT GGTTTAGGAA AAAATCCAGC TGCCGAAAAA
ATTGATGTAG ATGAGAACGG CAAGATTAGT GGGTTAAGTT AA
|
|---|
| Protein sequence | MKSDIEIDHS IKALPITEIG KQIGLSDSQL IPYGHDKAKI DAYSIANMPR QGKLVLVTSI
NPTPAGEGKT TVTIGLVDAI NRLGKSAIGA LREPSMGPVF GLKGGATGGG YAQVIPMEDI
NLHFTGDIHA VSAAHNLLAA VIDNHLHQGN ELKIDPENIY WRRVLDMNDR ALRQITLGKG
RVNGPERNSG FDITASSEIM AVLTLSKNLF DLKKRLSRIV VALDVQGKPV TVADLKVAGA
LTAILKDAIN PNLVQSLEHS PFIIHGGPFA NIAQGTNSVV ATDAALKLAD FAVTEAGFGS
DLGGEKFMDV KVPVLGKEPD AVVIVATVKA LKFHGGVALD HLSDKNVDAV RNGLDNLNRH
LEAMTHYGKP VVVALNKFLD DDMEEIQLIK NFVEGEKKLQ FEIVTSFVDG FEGSLDLAKK
VIEATDNQRF FMPLYQADDS IENKIQTIVE KIYGGKDFEL SDRAKKDLAE VKENGWGKLP
VVIAKTPNSL TDDSKIHGAP TGFTIHIRRF IPKIGAGFIV AMAGKVLMMP GLGKNPAAEK
IDVDENGKIS GLS
|
|---|
| |