| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0705 |
|---|
| Symbol | |
|---|
| ID | 4416915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 663503 |
|---|
| End bp | 664798 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639668923 |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_810304 |
|---|
| Protein GI | 116490760 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0653498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATG AGAACTCACA ATCTATAATT ACAGATTCTC AATCCAATCT GCAAATAATC
AAGGATGTGT CAAGTAATTT GATCGGTTCT TTAAGTGGTG GAATGTTCTC TTTTGCGATG
GGGTTAATGC TATTGCATGA TACTAAATCG CCACTTAGTT TTGGGCTTGA GACGATTATT
TCTCCAATTG TCAGTTTGCT GTTTTTAGTT CCGGTTGGAA ATCTTGTTGA TAAATACAAA
CACAAATTTA TTTTAGTCAG CAGCATCCTG TTAAGAATAA TATTTTTACT GATTTTTGCT
TTTTCTATTA ATATTTTTTT CGGTATTTAT AAATTGATTC CGGTAGCGAT TTTCGTTACC
GTAAATTCAA TTTCAACTAA TTTTTCTACT ACCGCTTATT CAGCCTCGGT TCATGAACTT
GTCAATGATA AAAAAATCCA GAAATTAAGT TCGCTAAGCC AGTCGGCATC GGCACTTTCT
TCTATTTTGG CACCGGTCCT CGGAGTGGCC TTGTATGCTT TGACAGGTTT TAGATTCTTC
ATTTTTATCG AAATCATTAC GACTTTGGTT TCCTTTGCAA TATTGTTAAC GATGAATTTC
CACTATGAAA AAAGAGAAAA TTATTCCAAA ACGAAATTAG ATAATGCTAT ATCCGGGTTC
TCGAACTTTA AAATTGGATT AACTTATATT AAAGAACGCC CGTTAATTAA AAACATTGTT
TTCGTTGCCG TTGTCATTAA TTTTCTTTTC ACGGCCATAA CTGTTGGAAT GCCGTTTATG
ATCGTTACTC GTTTGCACGA CGGAAACGGA CCGGTCGGTT ATATAGAAAC TGGTTTTGCG
CTTGGTTTGT TACTGGGCAG TTTGTTGATG AGCATTTTAC CGAGTGATAA ATACCTATTT
TTCAAATTTT CTTTGCCTTT GCCACTTATG GGTGTTTCGA TGGCTTTATT AGGTTTCTTA
ATTGATATAT TTCACGACCC TTTAAGGATA AGCTTGTATG GATTTTTGAT TGTTATGTTA
TCAGGCTTTA TGAATGGAAT TTTCAATGTC GCAGTCAATG TTAAATTGCA AACTAGCGTG
CCAACGCATA TTCTTGGTCG GGTAGTGTCG ATTCTGGTGA CTGCTGTAAC TGCCATAATG
CCAGTCGGCA CGCTATTCTA TACCTTTTTG TTTCAAAAGA TTATCAACGG TTCCAACATT
TTAATTTTCA GTGGTATCTT TTTATTCGTA TATGCTTTTG TTTTTGGTTT TTCAATTTAC
AGAGATGTTA TGACAGATAG TTATTCAAAA ACATAA
|
|---|
| Protein sequence | MTDENSQSII TDSQSNLQII KDVSSNLIGS LSGGMFSFAM GLMLLHDTKS PLSFGLETII
SPIVSLLFLV PVGNLVDKYK HKFILVSSIL LRIIFLLIFA FSINIFFGIY KLIPVAIFVT
VNSISTNFST TAYSASVHEL VNDKKIQKLS SLSQSASALS SILAPVLGVA LYALTGFRFF
IFIEIITTLV SFAILLTMNF HYEKRENYSK TKLDNAISGF SNFKIGLTYI KERPLIKNIV
FVAVVINFLF TAITVGMPFM IVTRLHDGNG PVGYIETGFA LGLLLGSLLM SILPSDKYLF
FKFSLPLPLM GVSMALLGFL IDIFHDPLRI SLYGFLIVML SGFMNGIFNV AVNVKLQTSV
PTHILGRVVS ILVTAVTAIM PVGTLFYTFL FQKIINGSNI LIFSGIFLFV YAFVFGFSIY
RDVMTDSYSK T
|
|---|
| |