| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0672 |
|---|
| Symbol | ddl |
|---|
| ID | 4416813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 634208 |
|---|
| End bp | 635341 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639668891 |
|---|
| Product | D-alanyl-alanine synthetase A |
|---|
| Protein accession | YP_810274 |
|---|
| Protein GI | 116490730 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00380934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA AAATACGTGT CGGCCTTTTT TTCGGCGGGA ATTCATCTGA ACACGATGTT
AGCAAGCGTT CGGCGAAAAA TTATTATGAC GCATTGGATC CGGAAAAATA TCAGATTTTC
CCTGTATTAA TTTCTAAAAA AGGGATTATG ATCGATAGCG AGACTTCTAA AAGAGTTCTT
TTCGGTGAAG ATGAAGATGA ACTTTTAGCG GGTCTTCCGA ACAAAAATGC TGATATTTTT
GGACCGATTG ATTCAATTAG AAATTTAAAG TTGGATGTTT TATTTCCCTC GGTGCATGGA
AATCTTGGCG AAGATGGCAC TTTAGCAGGA TTGTTCCGTT TGATGAACAT TCCTTATGTT
GGATCGGGAC TTAGAGCTCA TGCAATCAGT TTCGATAAAG TGATTACCAA AGAACTAATG
ACAGTTAACG GTATTCGAAA TACAAAATAT ATCGTTATTT TTCAAAATGA TAAAAATAAA
CCCGATTGGG ATTCCGTAAG TAAACAACTT GGCGAGGTAG TCTTTGTGAA AGCTGCTAAC
CAAGGTTCTT CGGTTGGCGT TTCTCGAGTT ACTAATGCTG AAGAGTATGA AAATGCTTTG
AGGGATTCTT TTCAGTACGA TGAAAAGCTA TTAGTTGAAA AAGCTGTTGA AAGTCCAACT
GAGTTGGAAA TTGGTTTGCT GGGCAATGAT CGTGTCATTA CCAGCCCAAT CGGAGCACAT
TGGGCTCCTG GGCAGGATCA TGGCAGTGGA TGGTTTGACT ATAAAAATAA ATTTGTTGAT
AATTCAAAAA TGAAGTACCA AATTCCAGCC AAAATATCTC CAGCCAAAAG CAAGGAACTC
GAGAATATGG CTGTAAAAGC CTATAAAGTA CTTGGAATTA AAGGATTTGC CCGGATTGAT
TTTCTGATGA GCAAAGATGG AGAAATTTTC CTAAGCGAGC CTAATACACT ACCGGGAAAT
ACGAATATGA GTCTTTTCCC GATTTTGTTT GAGGCCGCCG GAATGAATCG AAGCCAACAG
GCGGAAAAAC TAATTCAATT AGCTTTTGAA GAATTTAAGC GCGAACAAAA TATTAGTTAT
TCCTTTAAAG AACTCGGTTC GGAAAAACTC GGGCAGTTCG ATATTAAAAA ATAA
|
|---|
| Protein sequence | MAEKIRVGLF FGGNSSEHDV SKRSAKNYYD ALDPEKYQIF PVLISKKGIM IDSETSKRVL
FGEDEDELLA GLPNKNADIF GPIDSIRNLK LDVLFPSVHG NLGEDGTLAG LFRLMNIPYV
GSGLRAHAIS FDKVITKELM TVNGIRNTKY IVIFQNDKNK PDWDSVSKQL GEVVFVKAAN
QGSSVGVSRV TNAEEYENAL RDSFQYDEKL LVEKAVESPT ELEIGLLGND RVITSPIGAH
WAPGQDHGSG WFDYKNKFVD NSKMKYQIPA KISPAKSKEL ENMAVKAYKV LGIKGFARID
FLMSKDGEIF LSEPNTLPGN TNMSLFPILF EAAGMNRSQQ AEKLIQLAFE EFKREQNISY
SFKELGSEKL GQFDIKK
|
|---|
| |