Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0631 |
Symbol | |
ID | 4416549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 593191 |
End bp | 594009 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639668851 |
Product | spermidine/putrescine ABC transporter permease protein |
Protein accession | YP_810238 |
Protein GI | 116490694 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000147089 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGG GGAAACTGTT TTTCGCAGTC CTTTATGTTC TTTGGCTGGC TTTATTTGTT GTAGTTCCAA TTGCCTTGCT GCTTTTTCAA TCTTTAACCA GTGAAAGTGG ACAGTTGACC TTGAATAATT TTGTTTCTTA TTTTTCTTCC GGAACATATC TTCGAATGAC TTTTAACTCG ATCTTTTACG CTTTTTTGAT TACTTTGATT ACACTTGTCA TTTCTTATCC AACGGCCTAT CTTCTGTCCC AGTTGAAGAA TCGCCAGTTT TGGTTGCTTT TGGTAATATT GCCAACCTGG ATCAATTTGT TACTGAAAAC ATATGCCTTT ATCGGTTTAT TGTCTCGTGA TGGTACGGCG AATTCTTTTA TTGGCTTATT CGGCATTAGT CCTCAGCAGT TGCTTTTCAC AGATTCAAGT TTCGTACTCG TTTCCAGCTA CATTGAAATT CCCTTTATGA TATTGCCGAT TTTTAATGCT TTAAACGAAA TTGATCGAGA TTTAGTTCAA GCAAGCCGGG ACCTTGGCGC AAATTCCTGG CAAACACTTT GGCGTTTGAT TATTCCTTTA TCGATGCCCG GGGTCAAGTC TGGAGTTCAA TCCGTTTTTA TTCCTTCTTT GAGCCTCTTC ATGATCACGC GTTTAATCGG TGGAAATCGG GTTATCACCT TGGGGACGGC AATTGAGGAA CTTTTCCTGA CTACTCAAAA TTGGCACATG GGTTCTACGA TTGGAGTCAT TTTGATTATT GCGATGGTTG CAACAATGGT TATCACCCGC GAACGGAAGA AATCGGTTTT ACGTAGGGGA GGCAAATAA
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Protein sequence | MKKGKLFFAV LYVLWLALFV VVPIALLLFQ SLTSESGQLT LNNFVSYFSS GTYLRMTFNS IFYAFLITLI TLVISYPTAY LLSQLKNRQF WLLLVILPTW INLLLKTYAF IGLLSRDGTA NSFIGLFGIS PQQLLFTDSS FVLVSSYIEI PFMILPIFNA LNEIDRDLVQ ASRDLGANSW QTLWRLIIPL SMPGVKSGVQ SVFIPSLSLF MITRLIGGNR VITLGTAIEE LFLTTQNWHM GSTIGVILII AMVATMVITR ERKKSVLRRG GK
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