| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0626 |
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| Symbol | truA |
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| ID | 4416544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 589431 |
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| End bp | 590189 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639668846 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_810233 |
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| Protein GI | 116490689 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.133889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAATT ATAAGGTTAC AATTTCATAT GATGGTCATT ATTTTGAAGG TTTTCAAACG
CAAAATAGGC CGGGTAGCAG AACTGTTCAG GATGAATTAA TTAAGGTTGT TTCAAAAATG
GCTAAAACGA AAATCAAGGT TATCGGAGCT AGCCGAACGG ATGCCGGCGT TCATGCTAAC
GGTCAGGTAA TCAATTTCAT TTTTCCTTTT GATTTAAATG AAAAAGCAAT TTTAATGGGG
ATGAATAGTC AATTACCGAC CGATATTCTT GTTAAAAAAG TTGAGAAAGT GCCAATTAAC
TTTAATGCTC GACACAGCAG CCATCGGAAA CGTTATTTAT ATCGAGTTTC GACAAGTAAA
TTTATCGATC CTTTCAAACG TTTTTATACC GGACATTATT TTTGGAATTT GGATACTAAT
AAAATTCAAG AAGCCTTACC TGATTTAATT GGCGAACACG ATTTTTCCAG TTTCGCGGCT
TCCGGTAATC AAACAGCCAC TACGATCAGA ACGGTTACAA AAGCGGAGTT GAAGATTTTT
CCTAAAAATA ATGAATTATT ATTTACTTTT GAAGGAAACG CCTTTCTTTA TAATCAAATT
CGGATTATGG TCGGCGTACT TTTGGAAATT GGCAATGGAA CAAGACCGGT CCATGATATT
ATTCGTTTGA TTAAAATTAA AGATCGTCAA CAGGCACGTT TCACAGCTCC AGCATCTGGA
CTATACTTAG ACGAGGTTTA CTATGAGTCA ATGGATTAA
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| Protein sequence | MQNYKVTISY DGHYFEGFQT QNRPGSRTVQ DELIKVVSKM AKTKIKVIGA SRTDAGVHAN
GQVINFIFPF DLNEKAILMG MNSQLPTDIL VKKVEKVPIN FNARHSSHRK RYLYRVSTSK
FIDPFKRFYT GHYFWNLDTN KIQEALPDLI GEHDFSSFAA SGNQTATTIR TVTKAELKIF
PKNNELLFTF EGNAFLYNQI RIMVGVLLEI GNGTRPVHDI IRLIKIKDRQ QARFTAPASG
LYLDEVYYES MD
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