| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0605 |
|---|
| Symbol | rplN |
|---|
| ID | 4416691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 578437 |
|---|
| End bp | 578805 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639668825 |
|---|
| Product | 50S ribosomal protein L14 |
|---|
| Protein accession | YP_810212 |
|---|
| Protein GI | 116490668 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0093] Ribosomal protein L14 |
|---|
| TIGRFAM ID | [TIGR01067] ribosomal protein L14, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000178049 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAC AAGAAAGTCG CCTTAAAGTT GCTGATAACT CTGGCGCTCG TGAAATTTTG
ACAATCAAAG TTCTTGGCGG TTCCGGAAGG AAATTTGCTA ATATCGGCGA TATGATTGTC
GCCACTGTTA AACAAGCTAT TCCTGGCGGC ACCGTTAAGA AAGGTGATGT TGTTAAAGCG
GTTATCGTTC GTACGGTTAG TGGTGTTCAT CGAATTGATG GTTCATATAT TAAATTTGAT
GAAAATGCCG CTGTCATCGT TAGAGATGAT AAGTCGCCGG TTGGTACACG TATTTTTGGA
CCTGTCGCAC GTGAATTACG CGATAACAAC TATATGCGTA TTGTAAGTCT TGCGCCGGAA
GTTCTATAA
|
|---|
| Protein sequence | MIQQESRLKV ADNSGAREIL TIKVLGGSGR KFANIGDMIV ATVKQAIPGG TVKKGDVVKA
VIVRTVSGVH RIDGSYIKFD ENAAVIVRDD KSPVGTRIFG PVARELRDNN YMRIVSLAPE
VL
|
|---|
| |