| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0598 |
|---|
| Symbol | rplB |
|---|
| ID | 4416684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 575186 |
|---|
| End bp | 576025 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639668818 |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_810205 |
|---|
| Protein GI | 116490661 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000263643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATCA AGACTTATAA ACCGACAACT AATGGACGTC GTAATATGAG CGGATTTGAT
TTTTCCGTTA TTACAAAAAC GACACCAGAG AAAAGTTTGT TGGCAAAAAA ATCTAAGACC
GGCGCTCGTA ACGCTGAAGG TCGTATGACT GTTCGCCATC ATGGTGGTGG TCATAAGCAG
CAATATCGTA TTATTGATTT CAAACGAATC AAGGACGACA AGACTGCCAC GGTTAAAGCA
ATCGAGTATG ATCCTAATCG GACTGCTAAT ATTGCTTTGC TCGTTTATGA AGATGGTGTG
AAGAGTTATA TCTTGGCGCC TAAGGGATTA GAAGCTGGAA CTAAAGTTCA GTCTGGTCCC
GATGCCGATA TTAAGGTCGG TAATGCGTTG CCGTTAGGCA ACATTCCCGA AGGTACATTA
ATTCACAATA TAGAATTAAA ACCTGGTAAG GGCGGTCAGC TGGCTCGTTC GGCTGGTACT
TCGGCACAAA TTTTAGGTAA GGATGATGCT GGCAAATATG TGATTATTCG TTTATCATCT
GGCGAAGTTC GTATGATCCC TGCTACTTCT CGTGCAACGA TTGGTGAAGT TGGCAACGCT
GAACATTCAC TTATCAGTTG GGGTAAGGCA GGTCGTTCCC GCTGGCGCGG CAAGACTCCA
CATGTTCGTG GTTCTGTTAT GAACCCGAAT GATCACCCAC ATGGTGGTGG TGAAGGAAAA
GCTCCTGTCG GTCATCCGAG TCCTATGAGC CCATGGGGCA AGAAGTCTTA TGGTAAGAAG
ACTCGTGATA AGAAGAAGCC ATCAACTAAG TTCATTGTTC GTGGACGGAA GGGTAAGTAA
|
|---|
| Protein sequence | MAIKTYKPTT NGRRNMSGFD FSVITKTTPE KSLLAKKSKT GARNAEGRMT VRHHGGGHKQ
QYRIIDFKRI KDDKTATVKA IEYDPNRTAN IALLVYEDGV KSYILAPKGL EAGTKVQSGP
DADIKVGNAL PLGNIPEGTL IHNIELKPGK GGQLARSAGT SAQILGKDDA GKYVIIRLSS
GEVRMIPATS RATIGEVGNA EHSLISWGKA GRSRWRGKTP HVRGSVMNPN DHPHGGGEGK
APVGHPSPMS PWGKKSYGKK TRDKKKPSTK FIVRGRKGK
|
|---|
| |