| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0564 |
|---|
| Symbol | |
|---|
| ID | 4415845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 542045 |
|---|
| End bp | 543067 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639668787 |
|---|
| Product | glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_810174 |
|---|
| Protein GI | 116490630 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.525167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGC AAACACGTAA AATTGCTATT CTTGGAGCCG GATCTTGGGG AACTGCTTTG
GCTTCAACCT TTTCGATGAA TGGTAATCAA GTAATTCTTT GGGGGAAAAA CCAAAGCGAT
ATTGATGATA TTAATCAAAA TCATCAAAAT CGAAGGTTTC TTCAAGAAGC TTTTTTGGAT
AAAAATCTTA AAGCAACAAC TGATTTAAAA GATGCTGTTA AAGATGCCGA GATTGTTTTG
TTTGTTGTAC CAACTTCGGC GGTTCGCCAG GTTGCCGGGA AATTAGCCAG TATTTTGCCG
AGTTTGAAAA ATGAAATTAT CTTCGGCCAT GCTATTAAAG GAATTGAAGT AGATTCCAAT
AAGCGTGTCA GCCAAATGAT TAGCGAGGAA ATCCCGAGTA TCAAGGAGGA TGATTTATTC
TTTATTTCCG GGCCATCCCA TGCCGAGTCA GTTGTTAAAA GGGCTATTAC TTTAGTTGCA
GTTGCAAGCT CCAATCAAGC ACGGGCGGCA ATTATTCAGG CAGCGCTGTC TAATTCCTTC
TTTCGTGTAT ATACCAATTC TGATTTATGC GGATCGGAAT ATGCAGCAGC TTTGAAAAAC
GTTCTTGCAA TTGCTGGTGG CATCATAAAA GGCCTCAAAA TGACCGACAA TACTCAAGCA
GCTTTGGTTA CTCGCGGGCT TTCCGAAATG CGTCGTTTGG GAGTTGCTTT AGGCGGAAAA
AGCGAAACAT TTAATGGTTT GGCTGGCTTA GGCGATTTGA TCGTTACTGC TATGTCAACT
AATTCCCGCA ATTTTCGTGC CGGTCTCGGC CTTGCTTCCG GGAAAGATTT AAAACAGGTC
CAAAAAGAGA TGGGTATGGT GATTGAAGGC GTTAAAACTG CCAAAGCAGT AGACCAATTG
TCAAGAAAAA ACAATATTTC TATGCCAATT AGCGAAAGTG TCTATAAAAT ACTCTATGAA
AATGCGAAAA TAGATGATGT AGTCGCTGAT CTTATGAATC GGCCACTGAT CTCGGAGGAA
TAA
|
|---|
| Protein sequence | MIKQTRKIAI LGAGSWGTAL ASTFSMNGNQ VILWGKNQSD IDDINQNHQN RRFLQEAFLD
KNLKATTDLK DAVKDAEIVL FVVPTSAVRQ VAGKLASILP SLKNEIIFGH AIKGIEVDSN
KRVSQMISEE IPSIKEDDLF FISGPSHAES VVKRAITLVA VASSNQARAA IIQAALSNSF
FRVYTNSDLC GSEYAAALKN VLAIAGGIIK GLKMTDNTQA ALVTRGLSEM RRLGVALGGK
SETFNGLAGL GDLIVTAMST NSRNFRAGLG LASGKDLKQV QKEMGMVIEG VKTAKAVDQL
SRKNNISMPI SESVYKILYE NAKIDDVVAD LMNRPLISEE
|
|---|
| |