| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0554 |
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| Symbol | prfB |
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| ID | 4416864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 533488 |
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| End bp | 534606 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639668777 |
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| Product | peptide chain release factor 2 |
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| Protein accession | YP_810164 |
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| Protein GI | 116490620 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0168531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTAG CACAAGCAAG AAATTCAATC AGCGACATGC AGGAACAAAT AGATGGTTTT
CGTTCTACTT TAGACCTGGA CGCTCTCGAT GCATCAATTG CGGAAAATGA AGATAAGATG
AGCCAACCGG GTTTTTGGGA TGATCAGCAG TCTGCTCAAA AAATCATTGA TGAAACTAAT
ACTTTGAAAA ATCGGCGTGA TTCCTTTTTG AGTCTGCAAA AATCGGTTGA AGATCTGACT
GCAATGGCGG AACTGCTGTC GGAGGAGGAT GATGCGGATA TGCACGCTGA ACTCGACACG
GATATCGAAA AAACCGAAAA GGATTTGGAA AAATATAATC TGAATCAACT TTTAACTGAA
AAGTACGATT CAAATAATGC AATTTTGGAA ATTCATCCGG GCGAGGGTGG TACTGAATCA
ACCGATTGGG CCAGTAATCT TTACCGAATG TACACTCGTT GGGCTCAAGC CCATGATTTC
AAAGTCGAAG TGACGGATTA CCAAACCGGT GATGTAGCCG GAATCGACTC GGCTACGCTG
CGAATTATCG GTCACAACGC ATATGGCTTT TTGCGAAGCG AAAAAGGAGT TCACCGTTTC
GTTCGTATCA GTCCCTTCGA CTCGGCTGGG CGCCGACATA CATCGTTTGT TTCCATCGAT
GTTATGCCCG AATTAGATGA TGACGAGATT GAAATAGAGA TTAAACCTCA GGATGTCAAA
ATGGATGTGT ACCGTTCCGG GGGCGCCGGT GGCCAAAATG TCAACAAAGT TTCAACTGCC
GTTCGTTTGA CTCATATTCC AACTGGAATC GTTGTAGCTT CCCAGGTTGA AAGAACTCAG
TATGGTAATA GAGACATTGC AATGAAGATG TTAAAGGCCA AACTTTATGA GCAGGAAGAA
CAAAAGCGTG AAGAAGAACA TGCCAAATTA TCAGGCACGA AATTGGATGT TGCCTGGGGA
TCACAAATTC GCTCATATGT TTTTCAACCC TATCGAATGG TAAAGGACTT ACGTTCGGGT
TATGAAACCG GTGATACAGA TGGAGTTATG GATGGTAATT TGGATCCGTT TATTAATGCT
TATCTAAAAT GGAAGCTCTC CCAAAAAAAT CCGGAGTAA
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| Protein sequence | MELAQARNSI SDMQEQIDGF RSTLDLDALD ASIAENEDKM SQPGFWDDQQ SAQKIIDETN
TLKNRRDSFL SLQKSVEDLT AMAELLSEED DADMHAELDT DIEKTEKDLE KYNLNQLLTE
KYDSNNAILE IHPGEGGTES TDWASNLYRM YTRWAQAHDF KVEVTDYQTG DVAGIDSATL
RIIGHNAYGF LRSEKGVHRF VRISPFDSAG RRHTSFVSID VMPELDDDEI EIEIKPQDVK
MDVYRSGGAG GQNVNKVSTA VRLTHIPTGI VVASQVERTQ YGNRDIAMKM LKAKLYEQEE
QKREEEHAKL SGTKLDVAWG SQIRSYVFQP YRMVKDLRSG YETGDTDGVM DGNLDPFINA
YLKWKLSQKN PE
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