Gene OEOE_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_0488 
Symbol 
ID4416763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand
Start bp476270 
End bp476956 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content35% 
IMG OID639668718 
ProductDNA-binding response regulator 
Protein accessionYP_810107 
Protein GI116490563 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAC CAATCATTCT TATAATCGAA GATGAGACAG CTATTGTAGC TTATTTACAG 
ACGGAACTTA AATTTGAAGA TTATATTGTT TTGACAGCTA GTGATGGCGA AATGGGCCTT
TCAGTTTTTG AACAGAATTC AAACCGAATT AATGTAGTTT TGCTTGATTG GATGTTGCCA
AAACGAGATG GACTCGAAGT TTTACGGCGC ATTAGAAAAT TAAATAGTCA GGTTTCTATA
ATTCTTATGA CCGCTAAAAG TGATATTGGC GATAAAGTAG CTGCATTAGA TTCTGGTGCA
GATGACTATA TTACGAAGCC TTTTGAAATT GAAGAACTTT TAGCACGTTT AAGAGTGACG
ATTCGTCATC AAAATAAGCC ACGCCCAAAA CTATATCAGG TATCTAACTT AGTGCTGGAT
TTAGACGCAC ACCGTGTTAC AAGGGATGGA CAGGTTATTG ATTTAACGCA AAGAGAGTTC
CAACTTTTAA CATATTTAAT TGAAAATGCA GACAAAACGC TTACTCGTGA TGATTTACTT
GATAATGTTT GGGGAGTTGA TTTTAATGGT CAATATAATA CAGCTGATGT TTATATACGC
TATCTTCGTC AAAAGATAGA TGATCATTTT TATCCGAAGC TTATTCATAC GGTTCGTAGT
GTTGGATATG TCTTAAGGGC AAAATAA
 
Protein sequence
MVKPIILIIE DETAIVAYLQ TELKFEDYIV LTASDGEMGL SVFEQNSNRI NVVLLDWMLP 
KRDGLEVLRR IRKLNSQVSI ILMTAKSDIG DKVAALDSGA DDYITKPFEI EELLARLRVT
IRHQNKPRPK LYQVSNLVLD LDAHRVTRDG QVIDLTQREF QLLTYLIENA DKTLTRDDLL
DNVWGVDFNG QYNTADVYIR YLRQKIDDHF YPKLIHTVRS VGYVLRAK