| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0478 |
|---|
| Symbol | |
|---|
| ID | 4416718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 466241 |
|---|
| End bp | 467683 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639668709 |
|---|
| Product | D-xylose proton-symporter |
|---|
| Protein accession | YP_810098 |
|---|
| Protein GI | 116490554 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA AGAAAACGAA TATATCAAAA ACAAATTATG CTTTGAATTT TATCAAGACA
AAATCCAAAG CCGAACGACA TTTAAAAATA ATAGCCTTGT GTGTCACCCT TGGTGGTTTG
CTGTTCGGGG TTGACACTGG AGTAATTAAC GGGGCGCTGC CCTACATGGC TAAAAAACAA
GAATTAAATC TCAACCCTGC AACTGAAGGA TTAGTTACTA GCAGTATTAC TTTAGGAGCA
GCTTTTGGGG CAATATTTGC CGGAAGATTG GCTGATCGTT ATGGAAGAAA AAGAATTCTA
TTTTATCTAT CGATTGTCTT CTTTTTTTGT ACTGCAATTT GTTCATTAGC ACCTAATGCA
ATAATCATGA TGATTTTCAG ATTTCTACTT GGCTTGGCAG TCGGCAGTGC ATCAGTAATT
GTTCCAACTT TTCTATCCGA AATAGCTACG GTTAAACTAC GTGGACCTTT GGTCACTCAA
AACGAAATAA TGATTACCGG AGGCCAGTTA TTGGCTTTTG TGGTCAATGC GATTTTAGGA
AATATTTTTG TTAACGTATC GAATATTTGG CGTTACATGA TTGCTTTTGG TATGATTCCT
TCTGCATTGC TTTTTATCGG TACACTGATC GTTCCTGAAT CTCCCCGCTG GCTGATTATG
AAAGGCAAAA CCAAGACTGC TTTAAAAATA CTAAAAGGAA TTCGATCAGA TAAGAGACAA
AGCCAACAAG AAGTCACTCA AATTCAAGCT ACTCTAAAAA AAGAAAAAGA AGTTTCCCAT
ATAAGTTGGT ATGATCTCAA AAAGCCCTGG ATTAAAAAAC TAATTATCTT AGGTAGTGGG
CTTGGAATTG TTCAACAAAT CGTTGGAATT AATATCATTA TGTATTACGG AACAACCGTA
TTAATCAAGG CCGGTTTCAC CCATAATATC GCCTTAATTA CGAATATTGC CAACGGGATT
GTTTCAGTCT TGGCTACATA TACCGGTATG CATTTAATGA ATCACATCAA TCGTCGGAAA
ATGTTGCTAA CGGGAATTGC AGGTACAGGT GGTGCCCTGG CATTGATTAC ACTCGTTTCT
CAAATATTGC CGCATTCAAA ATTGCTTCCA GTATGTGTAG TCTTCTTAAC ATTGATTTTT
TTAAGTTTCT TTCAGGGATG CATTTCACCA ACGATTTGGC TTTTGATGTC AGAAATTTTT
CCTCAAAACC TGCGTGGTTT AGGGATGGGA ATCTCGACTT TTTTTCTTTG GATGGCAAAT
TTCCTAGTTG GTTTTCTTTT CCCTATATTT TTAAACTATT TTGGTTTTTC GATAACTTTC
GGAATTTTCG TTCTTTGTAA CTTGATTTCA TTCATTTTTG TCTATAAATT TGCCCCGGAA
ACAAGGAATA AATCACTAGA ACGTGTTCAA TTGGAACTTA GAACAAGAAT TGATAAGAAT
TAG
|
|---|
| Protein sequence | MENKKTNISK TNYALNFIKT KSKAERHLKI IALCVTLGGL LFGVDTGVIN GALPYMAKKQ
ELNLNPATEG LVTSSITLGA AFGAIFAGRL ADRYGRKRIL FYLSIVFFFC TAICSLAPNA
IIMMIFRFLL GLAVGSASVI VPTFLSEIAT VKLRGPLVTQ NEIMITGGQL LAFVVNAILG
NIFVNVSNIW RYMIAFGMIP SALLFIGTLI VPESPRWLIM KGKTKTALKI LKGIRSDKRQ
SQQEVTQIQA TLKKEKEVSH ISWYDLKKPW IKKLIILGSG LGIVQQIVGI NIIMYYGTTV
LIKAGFTHNI ALITNIANGI VSVLATYTGM HLMNHINRRK MLLTGIAGTG GALALITLVS
QILPHSKLLP VCVVFLTLIF LSFFQGCISP TIWLLMSEIF PQNLRGLGMG ISTFFLWMAN
FLVGFLFPIF LNYFGFSITF GIFVLCNLIS FIFVYKFAPE TRNKSLERVQ LELRTRIDKN
|
|---|
| |