| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0466 |
|---|
| Symbol | |
|---|
| ID | 4416522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 455318 |
|---|
| End bp | 456232 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639668699 |
|---|
| Product | mannose-specific PTS system component IID |
|---|
| Protein accession | YP_810088 |
|---|
| Protein GI | 116490544 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
|---|
| TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000120497 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG ATAAAATTAC CTTAACTAAA GGGGATCGTC TCCACGTTGC ATGGCGTTCA
ACGTTCATTC AAGGTTCATG GAACTATGAA CGAATGCAAA ATGGTGGTTG GGTTTATGCC
TTGATCCCCG CATTAAATAA ACTTTATAAA ACAAAAGAAG ATCGGGCGGC AGCATATAAA
CGTCACCTGG TATTCTTCAA TACTCACCCA TATTTGGCTT CTCCGATTAT TGGAGTTACG
CTTGCTTTGG AAGAGGACCG TGCCAATGGC GCCCCGGTTG ACGATGTGGC CATTCAAGGT
GTCAAGGTTG GTATGATGGG GCCTTTGGCA GGTGTTGGTG ACCCTGTCTT CTGGTACACG
GTTCGTCCTT TATTGGGGGC TTTAGGTGCA ACCCTGGCTC TTAGTGGAAA TGTTTTAGGA
CCAATATTGT TCTGGGTACT CTGGAACATT ATTCGTTGGG CATTTATGTG GTACACCCAG
GAATTCGGAT ATCGTGCCGG TTCGAGAATC ACTGATGATC TTTCCGGAGG ATTGCTCAAG
ACAGTTACTC GTGGTGCTTC GATGATGGGT ATGTTTGTTC TGGCGGCTTT GATTGAGCGT
TGGGTAAGTA TTAAGTTTAC CCCGGTTGTT TCCAAAGTTA CCTTAAGTAA AGGTGCCTAC
ATTGATTGGG GGAAACTTCC GTCGGGTACC AAGGGAATCA GAGAAGCCCT GACAGAACAG
GCAAATGGTT TGTCTCTTAC TAAAATTCAG ACAACCACTT TGCAACAGAA TTTGGACTCT
TTGATTCCTG GACTAATGGC TTTGCTTTTG ACTTTCGCCT GCATGTGGCT ATTAAAGAAA
AAAGTATCAC CAATTATTAT TATCTTAGGA ATCTTCGTAA TCGGTGTTGG TGGTCATCTA
CTTGGATTGC TTTAA
|
|---|
| Protein sequence | MAKDKITLTK GDRLHVAWRS TFIQGSWNYE RMQNGGWVYA LIPALNKLYK TKEDRAAAYK
RHLVFFNTHP YLASPIIGVT LALEEDRANG APVDDVAIQG VKVGMMGPLA GVGDPVFWYT
VRPLLGALGA TLALSGNVLG PILFWVLWNI IRWAFMWYTQ EFGYRAGSRI TDDLSGGLLK
TVTRGASMMG MFVLAALIER WVSIKFTPVV SKVTLSKGAY IDWGKLPSGT KGIREALTEQ
ANGLSLTKIQ TTTLQQNLDS LIPGLMALLL TFACMWLLKK KVSPIIIILG IFVIGVGGHL
LGLL
|
|---|
| |