| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0440 |
|---|
| Symbol | |
|---|
| ID | 4416616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 426995 |
|---|
| End bp | 428314 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639668673 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_810064 |
|---|
| Protein GI | 116490520 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGATA TTAAATATTT ACGGAATAAT CGAGATGAAG CCAACCAACG TTTGATTGAT
CGCAATGTTG AAGATGGCGT GTTAGATAAA TTATTAGCCG ACGACGAGAA GCGTCGTTCT
CTGATTCGCA AAGCCGAACA GTTGAAGGCG AAACGGAATC AGGTTTCCGA TCAAATTGGG
GCTGCCAAAC GGGCTAAAGA CAATTCAGCT GCTCAAAAAG CAATTAGTGA TATGCAGACC
GTTGCAGGTC AAATTAAAGA TTTGGATAAG CAATTATCGG CAATTGAAGA GTCTGTTCAT
ACCCAAGCTG CTCATCTGCC TAATTTGGCT GATCCGCGGG TGCCGGTTGG TCCGGACGAT
TCATATAATG TTGAACAAAG AAAGTGGCAA CCAACCGATC TTCAGGGCCG TCCGGCCGCT
TTTTCGAAAA CACCAACATG GTTGAAAGCC CATTTTGAAA TTGGCGAAGA TCTTGGTATT
TTGGATTTTC AACGAGGCGT AAAAGTATCC GGAGCGCGTT TTTTGTATTA TGTCGGCGCC
GGCGCCCGCT TGGAACGAGC TGTTTATAAT TTCATGCTTG ATGAACATCG CCGCGAAGGT
TACACAGAAT TGTTGACTCC GTACATGGTT ACCAACGAAT CGATGTATGC AACCGGCCAG
TTTCCGAAAT TTGTTGACGA TGCCTACGAG GTTGGCAAAA ATCAGTCGAT GACAATGATT
CCGACCGCTG AAGTCGCCTT GGTTAATTGG CGTCGCGATG AAGTTTTGGA TGAATCGGAA
TTGCCCTTAT ATATCACTGC CTTGTCGCCG GCATTTCGTC AGGAAGCCGG GGCTGCCGGG
AAAGATACGC GTGGTTTGAT TCGCCTGCAT CAGTTTAATA AAGTCGAAAT GGTTAAATTT
ACCAAGCCAG AGGATTCATA TAACGAATTG GAAAAAATGA CTGTCGATGC AGAAAATATT
TTGCAAAAAC TGGAATTACC TTACCATGTA ATTCGCCTTT CGACTGGGGA CATGGGTTTT
GGTTCTGCAA TGACTTACGA TTTGGAAGTT TGGTTTCCGA CCCAGGATAA ATATCGTGAA
ATTTCTTCTG TTTCTAATGA TGAAGATTTT CAAGCGCGCC GTGGACACAT TCAATATCGT
GATTCAAAGA CAGGCAAACT TCGTTTTGTT CATACTCTAA ACGGTTCTGG TCTGGCTGTT
GGCAGAACAG TTGCGGCTAT TTTGGAGAAT TATCAAAATG AAGATGGGAC AATTACAATT
CCCGAAGTTC TTCGTCCTTA TTTCGGCGAA GACAAGATTA GCAAAGAAAA TGCCAGGTAA
|
|---|
| Protein sequence | MLDIKYLRNN RDEANQRLID RNVEDGVLDK LLADDEKRRS LIRKAEQLKA KRNQVSDQIG
AAKRAKDNSA AQKAISDMQT VAGQIKDLDK QLSAIEESVH TQAAHLPNLA DPRVPVGPDD
SYNVEQRKWQ PTDLQGRPAA FSKTPTWLKA HFEIGEDLGI LDFQRGVKVS GARFLYYVGA
GARLERAVYN FMLDEHRREG YTELLTPYMV TNESMYATGQ FPKFVDDAYE VGKNQSMTMI
PTAEVALVNW RRDEVLDESE LPLYITALSP AFRQEAGAAG KDTRGLIRLH QFNKVEMVKF
TKPEDSYNEL EKMTVDAENI LQKLELPYHV IRLSTGDMGF GSAMTYDLEV WFPTQDKYRE
ISSVSNDEDF QARRGHIQYR DSKTGKLRFV HTLNGSGLAV GRTVAAILEN YQNEDGTITI
PEVLRPYFGE DKISKENAR
|
|---|
| |