Gene OEOE_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_0439 
Symbol 
ID4416615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand
Start bp426254 
End bp426952 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content37% 
IMG OID639668672 
Productpeptide ABC transporter ATPase 
Protein accessionYP_810063 
Protein GI116490519 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTAG CAGTTCAAAA ATTAACTCAT TATTTTAATC ATCCGGATGA CTACTTATAT 
AAGGATGTTA GTTTGAAGTT TGAATCATCG AAGTTTTATG CAATTGTCGG TGAATCGGGT
TCCGGGAAAA CAACTTTTGT TAGTTTTCTA GCCGGGCTTG ATTCGCCGGT TGCCGGAACG
ATTAATTTCA ACGGCAAGGA CATCAGAAAA ATCGGTTTGA CCAAATATCG TAACCAAGAT
GTGACAATTA TTTTTCAAGC CTATAATTTA ATGACCTATA TGTCAGCCTT GGAGAATGTT
ATGTCGGCTT TATCAATTAC AAATTCCAAG CATGCCGGCG ATAAACAATA TGCGACTGAT
TTGCTGGCTT CAGTCGGTAT CGATGGTGAT TTGATAAATA AAAACGTTCA AAAATTATCC
GGTGGCCAGC AACAGCGTGT TGCCATCATT CGTGCTTTGG CTGTTGATGC GCCGGTTGTT
GTTGCCGATG AGCCAACCGG TAATTTAGAT TCGCAAAATA CGAAAGAAAT TACGCAAATT
TTTAAAAAAG TTGCTCATGA TTCCAAGAAA ACCGTAATCG TAATTACTCA TGACCAAAAA
GTAGCTAGCA TGGCCGATGT TAAAATAGTT TTGGATGATC GCAAATTTAC AGTTAAAAAA
CCTAGAAAGA GAGTTTCTAA ATTAAGAAAA ATAAGCTGA
 
Protein sequence
MTLAVQKLTH YFNHPDDYLY KDVSLKFESS KFYAIVGESG SGKTTFVSFL AGLDSPVAGT 
INFNGKDIRK IGLTKYRNQD VTIIFQAYNL MTYMSALENV MSALSITNSK HAGDKQYATD
LLASVGIDGD LINKNVQKLS GGQQQRVAII RALAVDAPVV VADEPTGNLD SQNTKEITQI
FKKVAHDSKK TVIVITHDQK VASMADVKIV LDDRKFTVKK PRKRVSKLRK IS