| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0430 |
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| Symbol | |
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| ID | 4416570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 416953 |
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| End bp | 418374 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639668663 |
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| Product | transcription elongation factor |
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| Protein accession | YP_810054 |
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| Protein GI | 116490510 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.2178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCAG ATTACAGAAG AGAGTTGTTT TCTGCGTTAC AGGCATTACA AGCTGAGAAA
GGCATCAGCC AGGAAGATGC AATTACGTCT TTAAAAGATA CTTTAGTGAC TGCTTATAAG
AAGAATTTTG AAGGGGAAAC CAATGTCGAA GTTGATGTCG ATCCTGAAAA ACAGGAGTTT
AATCTTTTAC AAATTAAAGA GGTCATTCCT GATGGAGATA TGATTGACCC CTATTCGGAA
ATTTATTTGA AAGATGCACG AGAGATTAAT TCTGCATACG AAGCCGGTGA TCAGATCAAA
TTCGAAATTA ATCCGCGTGA TTTTGGCCGT TTGGCTGCTC AATCAGGGAA AAATAAATCT
ACTCAAACAA TTCGTGAAAA AGAAAAGGAG GCAATTCACG CTCGTTACGA AGGTTTCGAG
CATGAAATTG TGTCTGCGAG GGTTGCTCGT GAAGACCAAC GCTTTTTGTG GGTTACCATG
CCTGATGGTC AAGAGGCGGC CATGGGAGAC AAGGATCGTA TACCTGGCGA AACCTACAAG
ACCGGTGATC CAATCAAAGT TTTGATTAAT CGGGTCGAGG ATTCTGCTAC TCGCGGTCCA
CAGATCTACG TTTCTCGAAC GAGTCCGGAA TTAGTTAAAC GTTTATTCGA ACAGGAAGTT
CCGGAAGTTT ACGATGGCAC TGTCGTGATT GAATCAATTG CCCGGGAAGC CGGTGATCGT
TCGAAAGTGG CAGTTCGGAC AACCGATTCC AACCTTGACC CCATTGGTAC TCTGGTTGGG
ACTCGTGGTT CGCGTGTTCA GGCTGTTGTT AATGAATTGC ATGGCGAGAA CATGGATATT
GTTGAATGGG TCGAAGACGA AGCACAGTAT ATCGCCAATG CTTTGAATCC GGCCGAGGTC
GTCGACGTAA TTTTCAGTCC GGATAACGAT AATGAAGTTA CTGTTATTGT GCCTGATTAT
CAGTTGAGTT TGGCTATTGG AAAACGTGGT CAGAATGCAC GTTTGGCTGC CAAGCTAACT
AAGTTTAAAA TTGATATTAA ATCAGAAACA CAGGCGGAAA ACGACCCACA GCTTCAGGCT
ATTCTCGAAG AATCCGCTAA ATATGCAGAG GAAGAAGATC AATCGGACGA AACCGACGAA
ACGGATGAGG CTTTGGAAGA CGAGACCGAA TACGCCGACG CCAATGAATA TTTTTCTGAA
GGCGCTGATC AATCCGATGC ATCAGAAGAG GAGAAAACTT CCGAGTCCGC TGAAGAAAGT
AGTTCAGCCG AAGAAGATTC TTCAAAAGCA AAGGCTAAAA TGACTGAAGC CGAAGTTAAA
GAGGCTCAGG ACGAATTTGC CGCTGCCCTA AAGAATGTTG ATTTCGATGC TATTTTGGAA
GAAAAAGAGG GCGACGACAA CAAAAAGAGC GACGATAAAT AA
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| Protein sequence | MASDYRRELF SALQALQAEK GISQEDAITS LKDTLVTAYK KNFEGETNVE VDVDPEKQEF
NLLQIKEVIP DGDMIDPYSE IYLKDAREIN SAYEAGDQIK FEINPRDFGR LAAQSGKNKS
TQTIREKEKE AIHARYEGFE HEIVSARVAR EDQRFLWVTM PDGQEAAMGD KDRIPGETYK
TGDPIKVLIN RVEDSATRGP QIYVSRTSPE LVKRLFEQEV PEVYDGTVVI ESIAREAGDR
SKVAVRTTDS NLDPIGTLVG TRGSRVQAVV NELHGENMDI VEWVEDEAQY IANALNPAEV
VDVIFSPDND NEVTVIVPDY QLSLAIGKRG QNARLAAKLT KFKIDIKSET QAENDPQLQA
ILEESAKYAE EEDQSDETDE TDEALEDETE YADANEYFSE GADQSDASEE EKTSESAEES
SSAEEDSSKA KAKMTEAEVK EAQDEFAAAL KNVDFDAILE EKEGDDNKKS DDK
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