| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0427 |
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| Symbol | |
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| ID | 4416567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 413170 |
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| End bp | 415224 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639668660 |
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| Product | NAD-dependent DNA ligase |
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| Protein accession | YP_810051 |
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| Protein GI | 116490507 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAG CAGACCAGTT CACACCAATT GAAGATTTAA CGTTCACACA AGCTCAGGCG
GAAATCAGAG ATCTTTCGGA TGAATTAACC AAATGGGGAC GCGAGTATTA CGAAGAGGAT
AATCCAAGTG TCGAGGATTA CGTTTATGAC GCCCATTACG CCCGTCTGGT TGCTTTGGAA
AAGGCTTATC CGAGTTTGGC CATGCCTGAT TCGCCTACTC AACATGTTGC AGCTGGAAAT
CAGACGAAGA ATGATTCCCG TGGTTTACAA AAGGTCGTTC ACCCGGTTCC GATGCTGTCT
TTGGGGGATG TTTTTTCGAT TCAGGAATTG CTTGACTGGG ACCTTGTGAC AACGAAAAAT
GCCGGATCTC AACAGAAGTA TAATCTTGAA CTGAAAATTG ATGGTTTGGC AATTTCTTTG
AGATATGAAA ACGGAAGACT TATTCAAGCT TCGACGCGTG GGGATGGTTC TATCGGCGAA
AATGTGACCG ATAACGTTAA AACGATTACC GAGATCCCAA AAGTATTAAA TGAGCCGCTA
ACGATTGAGG TTCGCGGAGA AATTTACATG CGTAAAGAAG CTTTTGCTGA TTTGAATCAG
CAGCGCGACG AAGAAGGAAA AACAATTTTT GCCAATCCAA GAAATGCAGC CGCCGGCAGC
CTGCGTCAAT TAGACCCAAA AATTACTGCC AAAAGGCATC TTTCCTCCTT TATTTATTAC
ACGGCACAAA ATGATGTTTT GGGCGTCAAC ACCCAGTCGG ATGTTTTGGA ACGTTTCCGA
CAGTTGGGTT TTCCAGTTAA TTCCAGTAAT AAAGTAATCG ATAGGATGAC CGAAGTTAAA
GATTATATCG ATGAATACAC GATTAAAAGA GACAACTTGC CTTATGGAAT CGACGGAGTC
GTTGTTAAAG TAAATGATCT TGATGTGGAA AACGAGTTGG GCAATACAGT CAAAATACCA
CGTTGGTCGA TTGCTTATAA ATTTCCTCCG GAAGAAGCTT TGACAGTTGT TCGCGACATC
ACTTGGACGG TCGGTCGAAC CGGAGTTGTC ACGCCAACAG CTATTATGGA CCCTGTCTTT
CTTGCTGGTA CGAAAGTTAA AAGGGCAAGT TTGCATAATC CTGATTATTT GCAGGAAAAG
GATGTTCGAA TCGGCGACAC GGTAACTTTA CATAAAGCCG GTGATATTAT CCCGGAAGTT
GGGCAGGTCA TCTTAAAAAA GCGGCCTGCT GATGCTCAAG CTTATCCAAT TCCGGTTTAC
TGCCCTTCTT GTAAATCCAA ACTTGTCCAT GTCCAGGGCG AAGTGGCTCT TCGCTGCATT
AATCCTGAAT GTCCAGCCCA AATTAAAGAA GGATTGATTC ACTTTGCTTC AAGAAATGCG
ATGAATATTG ATGGATTAGG TCCTCGGGTT GTCGAACAGC TTTTATCCAA AAATCTGATT
AGGAAAATTT CTGATTTATA TGCCTTAACA GAAAGTCAAT TAACGACTTT GGATAAATTT
GCCGATTTAT CATCAAAAAA TTTGATTCAG GCAATTGATC GTTCACGCCA AAATTCAGTT
GAACGTTTAA TAACGGCCTT GGGCATTCGC GGGGTTGGTG CTAAGGCTGC CAAAGTGCTC
GCGGCGCATT TTAAGAATCT TCGTAATCTA CAAAATGCCG GAGCAGAGGA GATTGCCGAA
ATTGACGGTG TTGGTCAGGT AATGGCCGAT GCAATTAGAC AGTATTTCAA TAGCGAATCG
GTTGCCAGCT TAATTAACGA ATTGGAAAAT TTTCAAGTAA ATTTTGATTA TTTGACGACA
AGTACGGTTG ACGAAAAAAA TTACTTTTTC AATAAAAGAA TCGTTTTAAC CGGCAAACTT
ATTCATTGGA CACGACCACA AATGCAGGCT TGGCTTGAAG AACATGGCGC CAATGTTTCT
TCATCCGTTT CTTCAAAAAC AGATCTTTTA ATTGCAGGAA GCGATGTAGG TAGTAAACTA
GAAAGAGCGA ATAAATTAGG AATAAAAGTG ATTAACGAAC AGGATTTCAT TAATTTAAGC
AATGCTAAAA AATAG
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| Protein sequence | MNPADQFTPI EDLTFTQAQA EIRDLSDELT KWGREYYEED NPSVEDYVYD AHYARLVALE
KAYPSLAMPD SPTQHVAAGN QTKNDSRGLQ KVVHPVPMLS LGDVFSIQEL LDWDLVTTKN
AGSQQKYNLE LKIDGLAISL RYENGRLIQA STRGDGSIGE NVTDNVKTIT EIPKVLNEPL
TIEVRGEIYM RKEAFADLNQ QRDEEGKTIF ANPRNAAAGS LRQLDPKITA KRHLSSFIYY
TAQNDVLGVN TQSDVLERFR QLGFPVNSSN KVIDRMTEVK DYIDEYTIKR DNLPYGIDGV
VVKVNDLDVE NELGNTVKIP RWSIAYKFPP EEALTVVRDI TWTVGRTGVV TPTAIMDPVF
LAGTKVKRAS LHNPDYLQEK DVRIGDTVTL HKAGDIIPEV GQVILKKRPA DAQAYPIPVY
CPSCKSKLVH VQGEVALRCI NPECPAQIKE GLIHFASRNA MNIDGLGPRV VEQLLSKNLI
RKISDLYALT ESQLTTLDKF ADLSSKNLIQ AIDRSRQNSV ERLITALGIR GVGAKAAKVL
AAHFKNLRNL QNAGAEEIAE IDGVGQVMAD AIRQYFNSES VASLINELEN FQVNFDYLTT
STVDEKNYFF NKRIVLTGKL IHWTRPQMQA WLEEHGANVS SSVSSKTDLL IAGSDVGSKL
ERANKLGIKV INEQDFINLS NAKK
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