Gene OEOE_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_0378 
Symbol 
ID4416442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand
Start bp368924 
End bp369784 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content36% 
IMG OID639668616 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_810009 
Protein GI116490465 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TATCCGTTAA ATTTAATCAA AAGCAAATTT TTTTTGGAAT CATCGGCCTG 
CTATTGTTGG GAATCATTGG CATTTTCGCC TATAAACTGA ATGAATATTT TTCCGAACCT
GTAATTAAGG CTAAATCAAT AAATCTAGAT GCTTCGCCCT CGCCAAAATC AAAAATAATC
GAACGTTTAA AAAAAGATCA AAAAATAAAA GTATTGAAGA AAAACAACAA TACCGATTGG
TGGCAAGTTG AGATCGGTTC GCAAAAAGGT TGGGTTGCCT CCTGGCTGAT TCAAAAGAAA
AATTATAACG CCAAAAATGC TGGACGTTTA GCCGAGGCAA CGATTGTTCT CGATCCAGGG
CATGGAGGAG TTGATTCCGG AACTCAGGCA AGCAATGGAG CGATGGAAAA AACATATACT
TTAAGAACTG CTTTAAAGGT TTACAAATTA CTGAAGGCAA AAAACGTTCA CGTAATAATG
ACAAGGCATA CGAATAAAAC CGTTGCTCTA GCTTCTCGAC CAGCTTTATC GAATCGGGTT
AAAGCCAATA TCTATATTAG CTTTCATTTT AATTCAGCCG GCGAACAAAA TGCAGCCGAA
GGTTATGAAG TGTTTAAATA TAATCACAAC GCCAACAGTT TTGCTTCAAC GATAGATAAA
CAATTCAATA ATTTGCCTTT GTATAACCGC GGTGTTTCCT TTGGAAATTT TGAAGTCCTC
AGAGATAACA AAAGACCGGC TATTCTTGTA GAAATGGGCT TTATGGACAG CGATTATGAC
TTTAGTTATA TTCAAAAATC ATCCTATCAA CAAAAAGTTG CAAATGATGT CACAAAAAGT
TTAACTAGTT ACTTCAATTA A
 
Protein sequence
MKKISVKFNQ KQIFFGIIGL LLLGIIGIFA YKLNEYFSEP VIKAKSINLD ASPSPKSKII 
ERLKKDQKIK VLKKNNNTDW WQVEIGSQKG WVASWLIQKK NYNAKNAGRL AEATIVLDPG
HGGVDSGTQA SNGAMEKTYT LRTALKVYKL LKAKNVHVIM TRHTNKTVAL ASRPALSNRV
KANIYISFHF NSAGEQNAAE GYEVFKYNHN ANSFASTIDK QFNNLPLYNR GVSFGNFEVL
RDNKRPAILV EMGFMDSDYD FSYIQKSSYQ QKVANDVTKS LTSYFN