| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0328 |
|---|
| Symbol | |
|---|
| ID | 4416254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 319089 |
|---|
| End bp | 320225 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639668575 |
|---|
| Product | acetoin dehydrogenase complex, E1 component, alpha subunit |
|---|
| Protein accession | YP_809968 |
|---|
| Protein GI | 116490424 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATA TCTCAAAAAC AAATGATCAG ATTTTGGATT TTGATTACCA GCTAAAAGCT
CAAGATGATG CTTTTCCAAC GTTAAAGGTT TTGGACAACG ATGGTAAAAT CGTTGACGAA
AAGGCTTTGG AACGTGCTGA TTTAAGCGAT GATGATCTGA TTAACATTTT TCATAATATG
CTGCTTAACC GGCAACTGGA TATTCGTTCA ACTAAATTAG CAAGGCAGGG CAGGTTTGGT
TTCTTTGCTC CGACCGCTGG ACAGGAAGCG TCGCAAATGG CTTCGGCCTA TGCTTTTCAC
GATGAAGACT GGCTCTTTCC GGGATACCGT GATATTCCCG AAATAGTTGC TAAAGGATGG
CCGATCTGGA AGGCGATTCT ATGGAGCCGC GGTCACGTCG TTGGGAATGA ATATACGACC
GATGATGGTA AAGAAGTTAA TTCTTGGTTT CCACAAATTA TTATTGGCGC GCAGTATGTG
GAGGCAGCCG GTGTCGCTTT GGGATTAAAG AAGCGAAACA AAAAAGCTGT TTCTTATGCT
TATACCGGCG ATGGTGGCAC TTCGCAAGGC GACTTTTACG AAGGAATGAA TTTTGCGGCG
GCTTATCATG CAAATGAAGT CTTCTTTGTT CAAAATAACG GTTTTGCTAT TTCGACTCCA
CGCAAACTTC AAACTGCTGC TCCACATTTG GCGGCCAAAG GCTGGGCAGT CGGCGTTCCA
AGTCTGGTAG TCGACGGACA GGACGCAATT GCTGTTTATC TTGCAGCCAA AGAAGCACGG
GCTTGGGCAG TTTCTGGCAA AGGGCCGGTT TTGATTGAGA CTCTGACAGA CCGTTTCGAA
GCTCATTCTA CTGCCGGAGA CGACCCCCTT CGTTACCGTA CCAAAGAGGA TATTGCTGAT
TGGTGGAAAA AGGATCCTTT GATTCGCATG CGCAAATATA TTACGGACAA AGGACTTTGG
GATGAAGACA AAGAGAATGA TTATATTGCC CAGATTGATG CCCGAATCGA TGAAGATATT
AAAAAAGCCG ATAACATCGA CAAGCAAAAA ATCAGTGACT ACTTGAAGAA TACTTTGGAA
GTTCCTGGTT ATGCAATGAA AGAGCAAATT GAAAAATTCG AAAGTGAGGG CAAGTAA
|
|---|
| Protein sequence | MSNISKTNDQ ILDFDYQLKA QDDAFPTLKV LDNDGKIVDE KALERADLSD DDLINIFHNM
LLNRQLDIRS TKLARQGRFG FFAPTAGQEA SQMASAYAFH DEDWLFPGYR DIPEIVAKGW
PIWKAILWSR GHVVGNEYTT DDGKEVNSWF PQIIIGAQYV EAAGVALGLK KRNKKAVSYA
YTGDGGTSQG DFYEGMNFAA AYHANEVFFV QNNGFAISTP RKLQTAAPHL AAKGWAVGVP
SLVVDGQDAI AVYLAAKEAR AWAVSGKGPV LIETLTDRFE AHSTAGDDPL RYRTKEDIAD
WWKKDPLIRM RKYITDKGLW DEDKENDYIA QIDARIDEDI KKADNIDKQK ISDYLKNTLE
VPGYAMKEQI EKFESEGK
|
|---|
| |