| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0309 |
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| Symbol | |
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| ID | 4416235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 300156 |
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| End bp | 303716 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639668557 |
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| Product | DNA helicase/exodeoxyribonuclease V, subunit A |
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| Protein accession | YP_809950 |
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| Protein GI | 116490406 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02785] recombination helicase AddA, Firmicutes type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTT CTAAGAATCA ACGGGCTGTT ATTGCGCATA TTCCTGATCA TAACTTACTG
GTAGCAGCCT CAGCCGGTTC CGGTAAAACA ACTGTATTGA TTGAACATGT TTATCAACAA
CTGCTCTCCG GAAAAAGCAT TGATCGATTC TTAATTTCAA CTTTTACCGA TGCAGCAGCT
TTAGAAATGA AGAATCGTTT GGAAAAACGG ATTCGGGCTG GAATCACCGA AGAAGAAGGT
CAACTTAAAA GACATTTGCA GGAACAATTG TTGTTGCTTA ATTCTGCTGC AATTGGCACT
TTGGATTCTT TTTCTTTAAG AATTATCGAG CGTTATTATT CAGTAATTGG ACTTGATCCG
CGATATCGTA TGTTGGCTGA TCAAACTGAA AAAAATCTTC TTGTCAAAGA TGTTTTGGAC
GACACCTTTG ATGAAATGTA TCATGATGAA AAATTTCTAA GGCTCTTGAA TAATTTTTCT
TCCGCCAGCC ATGATCAGGA TTTAAAAAAT TTGGTCATCA AATTGAATAC GATGGCCGAA
ACTCGTGCCA ACCCTGATTT TTGGCTTGAT TCGATCGCTG AAAATTATCG TCTAAGCGGC
GGCCTGACGA AAGGTTCTTT TTGGAAAGAA TTATTACAAC CACAAATTTT TAATCGCGCT
TCGGCCGCCC TTTATCAGCT TCTTTCGGCC AAAAAAGGAG TTGAAGATCT CGAAGATTAT
CACAGTTACA TAGCTTATTT AGCTGATGCA GTTGGTCTGG TTCGCGGTTT TATCGAAGTT
TGCTCTCAAA ATAATTGGCA GCAAATGAGC GATTACTTTG TTAATAATTC CTGGCCGAAA
TCGGCTCGCA AATCAGGAAA AAACGAACAA GAAGCCGATT ATTTTGATAA CTGGATCAAG
CCCTGGATTA AAGAGGCTAA AGATTCTTAC CGTTCAATTG AAAGTGATTT TTTGTTTTTG
AATGAATCTC AATGGCTTGA TATCAGTGAA AAATCTCTAG GTGTTGTTGA AGAATTAATC
CGATTAACGA AAGTTTTCCG CAAAAAATTT GCTTTAAAAA AAAGAGAATT ATCGCTACTC
GATTTTTCCG ACGGTGAACA GTTTGCTTAT CAAATTCTCC AAAATCAGAC CGTTCGTGAA
GAAATTCAAT CACTTTTTGA TGAAGTACTT GTTGACGAGT ATCAGGATAT TAACGATCTT
CAGGAAAATA TTCTTACGGA CGTTTCCAAT GGATCGAATT TTTTTATGGT CGGAGATTTA
AAACAAAGCA TCTATGGTTT TCGACAAGCA GATCCAGTCA ATTTTTCAAA TAAATACATT
CAATATAAAG AGGGAAACGG CGGCGAATTA ATAGAGCTAT CTGAAAATTA TCGTTCGCAA
CACAACGTCG CCGATTTTAC GAATGCTGTT TTTCGCAAAT TAATGGACCG CAAACTTGGT
GGAATCGATT ATCGGGGGGA TGTCGAATTA AAAGCAGCCA ATCGGGATTA CCCAAAGAAT
CTGAAGAACG TTGCCGACAT CTCGATTTTC GATATTGACG AAGAGAGCAA CGAAGATGAA
GATTTTAATA GTCGTCAAGC GCAAATCGAA ATCATTGCTG CAAAAATTCA GGCGTTGGTT
GGACAGTCTG AAATTTATGA TCGCCAGAGT GGAAAAATGC GACCGCTTGT TTATCGGGAT
ATTACTATTC TTGAGCGTTC TCACAGCTGG GAAAATGATA TTCAAACAAT TTTTAAAAAG
TATCACATTC CAATTAATGT TGCTGCGGGT AATTTTTTGC AAGAATTTGA AGTATCGATT
GTTTTGAGTT TTTTAAAAAT TATTGATAAT CCTCATCAGG ATATTCCTTT GGTGGCTGTC
TTACGGTCTC CGATTTATGG ACTGGATGAG AATCAATTAG CCGAAATCAG GACAGCCGAT
ATGAAACATG ACTATTTTTC GGCCCTGCAG GCTTACGCTA AAACAGGTCA GGATTTAGAT
TTACAAAAAA AAATGGCGGC TTTTTTGGTT CAACTGGAAA ATTATCGAGA AATAGCTGCC
GATAATCAAA TCGTTGATTT GATTTGGCAA ATTTATAACG ATACTAATTG GCCGGAGTAT
GTTGCCGGGA TGGTTGGAGG GAGTCAAAGA CAGGCTAATT TGCATGCACT TTATCAATAT
GCCCAGCAGC TTTCCGATAA TCATTTCGTT GGCTTGTTTT CTTTTATTCG TTACGTCGAG
CAGCTGATGG ATTCGGTCGA AGACTTTGCC CAGGCACCGG TCGATATGGG TCAGGAGGCT
GTATCCGTAA TGACAATTCA TGCCGCGAAG GGGCTTGAAT TTCCGATTGT TTTTCTCTTG
AATTTGGATA AGCAAATTGA TAACCGTGAT TCCAATGGAG CGATGGTTGT TGATTTCGAT
AATGGAATTG GAATTGATTT CGTTCATCCA ACTTCCCAGG TAAAAATTCC GACAATTCAA
AAGATTGCTG TTGCCGAGAA AATTAAAGAG AAAAATTGGG CCGAAGAAAT GAGACTTTTG
TATGTTGCTT TAACAAGAGC CGAACAGAGA TTATATTTAG TTGGTTCAAG TAAAAGAATG
AGTGATTTAA TTCATAATTG GGGCACTCCG GTTTCAATCG GAAAAAAGGT AATTGCTTTT
CAAGATCGAA TGCGGGCAAA AAGTTATCAA AGTTGGATTG GCATGTCTTT GGCAAACAGC
GGATATATTA AATTGGACAA GGTTGAGGGG AATTATTCAA AAAAGGACCT TACTTTTAAA
ATTGAAAGTT ACAATGCACA AACAATTCCG AAAATTGTTG AAAATAAAGC AAAAATCAAA
CAGAACGAAC AAGAGGAGAC CGGGATCGAT CTTGCGCGAA GCAAGAAAAT TCTCGATTAC
AATTATCCTT ATAAAATCGA AAGCGAACTG GCGGCTTATC ATAATGTCAG TGAATTAAAA
CGTGTTTTTG AGGATCCTGA TTCCTTATTG ATGCCCGAAA TGAATTCCGA TCGTCAGCCA
CAAATTACCG AACTTCCCGA ACCAAAATTC ATTGGTGGCA ACGATCAAGA ACAAGTAAGT
TCTACCGACA AAGGAACGGC TACCCATTTG ATTTTGGAAA AGATCGACTG GAAAAAAGAA
ATCGACAAGG ATTATCTTCA ACAACTGATC AAAGAGAATA TTCCCGATCA AAAAACCCGT
CAATCAATCG AACTTGATCG AATTATCTGG TTTGCTAATT CGGAGTTTGG TACAGAAATA
AAAAAATCCG CGTCGACTTT AAAACGCGAA CAGACTTTTG CAATGCTTAT TCCGGCAAAA
CAAATTTATC AGCAGGTCGA GACAAGTGAT CCGGTTTTGG TTCATGGAAT TATTGACGGT
TATTTTATCA GCGATGGTCT AATTACTTTG TTTGACTATA AAACAGACCG TTTTGGCAAG
GACTACGTTT CCAAATTAAA GGAGAGATAC TCTGGCCAGT TGAATCTATA TGCGGCAGCC
TTATCCAGTA TTTACCCGAA TTTAAAGGTC GAAAGAAAAG TAGTTGTTGG TCTTCAAGGA
AAACGCCTGA TATATTTATA A
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| Protein sequence | MNFSKNQRAV IAHIPDHNLL VAASAGSGKT TVLIEHVYQQ LLSGKSIDRF LISTFTDAAA
LEMKNRLEKR IRAGITEEEG QLKRHLQEQL LLLNSAAIGT LDSFSLRIIE RYYSVIGLDP
RYRMLADQTE KNLLVKDVLD DTFDEMYHDE KFLRLLNNFS SASHDQDLKN LVIKLNTMAE
TRANPDFWLD SIAENYRLSG GLTKGSFWKE LLQPQIFNRA SAALYQLLSA KKGVEDLEDY
HSYIAYLADA VGLVRGFIEV CSQNNWQQMS DYFVNNSWPK SARKSGKNEQ EADYFDNWIK
PWIKEAKDSY RSIESDFLFL NESQWLDISE KSLGVVEELI RLTKVFRKKF ALKKRELSLL
DFSDGEQFAY QILQNQTVRE EIQSLFDEVL VDEYQDINDL QENILTDVSN GSNFFMVGDL
KQSIYGFRQA DPVNFSNKYI QYKEGNGGEL IELSENYRSQ HNVADFTNAV FRKLMDRKLG
GIDYRGDVEL KAANRDYPKN LKNVADISIF DIDEESNEDE DFNSRQAQIE IIAAKIQALV
GQSEIYDRQS GKMRPLVYRD ITILERSHSW ENDIQTIFKK YHIPINVAAG NFLQEFEVSI
VLSFLKIIDN PHQDIPLVAV LRSPIYGLDE NQLAEIRTAD MKHDYFSALQ AYAKTGQDLD
LQKKMAAFLV QLENYREIAA DNQIVDLIWQ IYNDTNWPEY VAGMVGGSQR QANLHALYQY
AQQLSDNHFV GLFSFIRYVE QLMDSVEDFA QAPVDMGQEA VSVMTIHAAK GLEFPIVFLL
NLDKQIDNRD SNGAMVVDFD NGIGIDFVHP TSQVKIPTIQ KIAVAEKIKE KNWAEEMRLL
YVALTRAEQR LYLVGSSKRM SDLIHNWGTP VSIGKKVIAF QDRMRAKSYQ SWIGMSLANS
GYIKLDKVEG NYSKKDLTFK IESYNAQTIP KIVENKAKIK QNEQEETGID LARSKKILDY
NYPYKIESEL AAYHNVSELK RVFEDPDSLL MPEMNSDRQP QITELPEPKF IGGNDQEQVS
STDKGTATHL ILEKIDWKKE IDKDYLQQLI KENIPDQKTR QSIELDRIIW FANSEFGTEI
KKSASTLKRE QTFAMLIPAK QIYQQVETSD PVLVHGIIDG YFISDGLITL FDYKTDRFGK
DYVSKLKERY SGQLNLYAAA LSSIYPNLKV ERKVVVGLQG KRLIYL
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