Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0265 |
Symbol | |
ID | 4415206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 254172 |
End bp | 255428 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639668519 |
Product | major facilitator superfamily permease |
Protein accession | YP_809912 |
Protein GI | 116490368 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0214342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAATT CATTGGTAAA AACAAAAGGT AATGTGTTGC AGCCAAGCGG CGTTGCGAGT TATCAAAAAC AAACACTTTG GTCATCGATT ATTGGTTATG CGATGGATGG GCTGGATATG ATGCTGCTTT CCTTCGTCCT TCCTTTGATC ATGGCTGATT TTCATTTAAC GACTGCTCAG GCCGGAGGAA TTTCGACAAT TACAATGTTT GGTGTGGTTA TAGGTGGAAC TGTTTTTGGA ATTCTAGCTG ATCATTTTGG AAGGGTAAAA GTTTTCACCT GGACAATTTT GATTTTCTCT TTATTCACTG GCCTCTCGGC TCTTTCTCCA TCGGATGGCG TTTTTATCGC GATGCGTTTT ATGGCCGGTC TTGGTTTGGG TGGAGAATTC GGAATTGGAA TGACACTTGT TTCTGAAAGC TGGCCAACAA AACTTCGTAC AAAAGCAACT TCCTGGGTTG CACTTGGATA TCAGGCGGGA ACTTTATTAG CAACTCTTTT GGCTGGGTAT GTTTCAACCA ATTTTGGTTG GCGAGGTGTG TTTGCGATTG GAATTTTGCC GGCTGCTTTA GCTTGGTGGA CACGCAGGAA CTTGGAAGAA CCAGCGATGT GGGTTGAAAA CCGCAAGACC GTAAAAAATA ATTTTGCGAT CAAACAATTA TTTATTAATA AAAAGATCAC CCTAACCACA ATTGGTTTGG TGATCTTAAC TTCCGTTCAA AATCTTGGTT ATTTTGCGAT TATGAGTTGG ATGCCGACAA TGTTGGCTAG CCAACGCCAT ATCGCAATCA GTGGAACAAT GTTCTGGACG CTTTCGACAA TTAGCGGCAT GATAGTCGGG ATTATTGTGT TTGCTTGGGC GGCGGATAAA TTTGGTCGAA AACCGGCTTT TATTACTTTT CAAATTTCGG CAGCCGTTAT TGCTTGGATT TATTTTCGGA TTTCAAATCC TGTTCTTCTG GTCGCTTTAG GTTCAGTTCT TGGATTTTTC GTTAACGGAA TGATGGGTGG CTATGGTGCT CTGCTTTCCG AACACTATCC AACCGAAATT CGTTCTACAG CGGAGAATTT GATCTTTAAT TTTGGTCGTT TTGTCAGTGG CTTTGGCCCC TTGTTTATTG GCATCGTCGC TTTGCATAAT TCTCTTTCAG CGGCTCTTGG CATGATTTCG GCAATCTATA TTGTTGCTGC TTTGGCCATG TTGTTCCTTA TTCCAGAAAC CAAGGGTCTT GATTTAGCTT CTATCAAGGA GATTTAA
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Protein sequence | MENSLVKTKG NVLQPSGVAS YQKQTLWSSI IGYAMDGLDM MLLSFVLPLI MADFHLTTAQ AGGISTITMF GVVIGGTVFG ILADHFGRVK VFTWTILIFS LFTGLSALSP SDGVFIAMRF MAGLGLGGEF GIGMTLVSES WPTKLRTKAT SWVALGYQAG TLLATLLAGY VSTNFGWRGV FAIGILPAAL AWWTRRNLEE PAMWVENRKT VKNNFAIKQL FINKKITLTT IGLVILTSVQ NLGYFAIMSW MPTMLASQRH IAISGTMFWT LSTISGMIVG IIVFAWAADK FGRKPAFITF QISAAVIAWI YFRISNPVLL VALGSVLGFF VNGMMGGYGA LLSEHYPTEI RSTAENLIFN FGRFVSGFGP LFIGIVALHN SLSAALGMIS AIYIVAALAM LFLIPETKGL DLASIKEI
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