Gene OEOE_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_0225 
Symbol 
ID4416012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand+ 
Start bp212848 
End bp213576 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content32% 
IMG OID639668484 
Producttranscriptional regulator 
Protein accessionYP_809877 
Protein GI116490333 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAA GAAATATTTT TAATTTCACA TCGACAGAAA CAGATATCTA CGATTTTTTG 
ATGTCGCATA AAGATGAAGT CATCAAATCA AATCTTCGTA ATCTAGCGAA AACGATTCAC 
GTTTCTCCTG CTTCTGTTCT AAGATGCATT AAAAAAATGG GTTTTAATAG TTTTTATGAA 
CTAAAATTTG ATTTTAGAAA CAAATTACAA GCAATTCAGG TGTATGGCCA GAGCGATCAT 
TTAATCGATA TTTCACGGGA TTTTTTTAAT CGTCCTTTAT TGGATCAATA TCAAAACACA 
ATTACGGATA TAAAAAATGT AATTGAAAAC AGCAAAATGG TCTTCTTTTT CGGAATTGGA 
ACTTCAGGAA TATTGGCAGA ATATGGATCG CGCCAATTTG CTAATTTTGG AATAAATTCT 
TTTTACAATA AGGATCCATA CTATCCTTTT CAGTTAATTG AAAAGGATAT TAGTTCCACA 
GTTATGGTTG TGCTTTCGGT TAGCGGTGAA ACACATGAGG TTATCAAGCA GATTACTAGT 
TTAAAGAATT TAAAGTGCAA AATAATCAGT ATCACTAATA CAAGCTATAG TATGGTTGCA 
AAACTTTCTG ATATTAATCT TTCTTATAAT ATCGGTGAGG AAGTATTTCC TGATGAGATA 
AACGCAACAT CGCAGATCCC GGTAATTTTT TTGCTTGAAC TTCTAGCGAG AGAATTGAAG 
AAAAAGTAA
 
Protein sequence
MSQRNIFNFT STETDIYDFL MSHKDEVIKS NLRNLAKTIH VSPASVLRCI KKMGFNSFYE 
LKFDFRNKLQ AIQVYGQSDH LIDISRDFFN RPLLDQYQNT ITDIKNVIEN SKMVFFFGIG 
TSGILAEYGS RQFANFGINS FYNKDPYYPF QLIEKDISST VMVVLSVSGE THEVIKQITS 
LKNLKCKIIS ITNTSYSMVA KLSDINLSYN IGEEVFPDEI NATSQIPVIF LLELLARELK 
KK