| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0221 |
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| Symbol | celD |
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| ID | 4416008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | - |
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| Start bp | 208972 |
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| End bp | 210324 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639668480 |
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| Product | cellobiose phosphotransferase system IIC component |
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| Protein accession | YP_809873 |
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| Protein GI | 116490329 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.719758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATA AACAAACAAG CTCCTTTAAA GATAATATGA CAAAAGCAGC TGGTAAGTTT
GCTGGGTCGC GATTTGTCCG AGCAATTATG CAGGCTGGTT TTAGTGTTAT CCCGTTTACA
ATCATAGGAG CAATTTTTTT AATTTTGACA GTGTTGCCGC AGGCTTTTCC AATTCCAGGA
TTCGCGGCGC TTTATGCTGA TACTCTTGGT CGATTTATCA ATCTGTTCCA GGTTGTCTAT
AATTCGACAA TGGGTATTTT AGCATTGGTT TTTGCTGGTA CATTTACTTA TTCGTACACC
AAAATATATC AAGAGGAAGA ACATATAAAT GTTGTTCCAA TGAACGCCCT GTTGATGTTT
TTAATGGCAT TCTTCATCAC TGTTCCACAA TTAGTTTGGA AGAACGGTAG TATCCAATTT
GTTCAGTCTC TAAAAGCCGT TAATATTATT GGTGGTGGCT ACGCCGTTTC AACTTCAGGA
ATTACAAGAA TTGCTGCCGT GGGTATTTTT ACCGGACTAA TTGTTGGCTG GATTACGGTT
CAGGTCTATC GTTTTACCAT AAAACACAAT TGGCAGATAA AAATGCCAGC TTCAGTACCG
GCTGGCGTGT CTAACTCCTT TAGCGCATTA ATTCCAGGTT TTTGTGTCGC TTTCGTGATC
GCGGCAATCG ATCTCATTTT GATCATTATG GGAACCGACA TATTCAAAAT TCTTTATATT
CCATTTTCAT TTGTTAGCAA CATCGCTGAT ACATGGTGGG GATTCTTGAT TATCGTCTTT
CTGATTCACT TCCTATGGTG GTTTGGTGTC CATGGAGCAA CTATTATGAG TTCCTTTTAC
ACACCAATCG TCTTGGCCAA CATGGCATCG AATGCCAAAG GAGGTTTTCA CTTCTTTGCC
GGTGATCCAT TGAACGCTTT CGTTATTATC GGAGGATCCG GGGCAACTTT GGGTTTGGCA
ATCTGGCTGT TATTCCGATC CCGTTCAACC CAATTAAGAG AAATTGGAAA AGTAGAAATT
GTCCCTGCTA TTTTCAATAT CAATGAGCCA ATGTTATTTG GTTTGCCGAT TGTCTATAAT
ATTAATCTAA TTATTCCATT TATCTGTGCC CCTCTAGCCT CAGGTATTGT CAGCTACGTC
GCGATAACAT CCAAATTAGT GCCGAAAGTT ATTCTTCAAC AGCCTTGGCC TACTCCGGTT
GGTTTAAGTG GTTTCATTGC AACAGCTAGT TGGAAAGGAG CTGTTCTTTC AATTGTCGAT
GCTATTGTCG CCTTTCTTGT ATGGTATCCA TTTATAAAAC ACTACGATAA TGTATTGCTC
AAACAAGAAA AAGAAAAAGC AGCTAAAATT TAG
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| Protein sequence | MDNKQTSSFK DNMTKAAGKF AGSRFVRAIM QAGFSVIPFT IIGAIFLILT VLPQAFPIPG
FAALYADTLG RFINLFQVVY NSTMGILALV FAGTFTYSYT KIYQEEEHIN VVPMNALLMF
LMAFFITVPQ LVWKNGSIQF VQSLKAVNII GGGYAVSTSG ITRIAAVGIF TGLIVGWITV
QVYRFTIKHN WQIKMPASVP AGVSNSFSAL IPGFCVAFVI AAIDLILIIM GTDIFKILYI
PFSFVSNIAD TWWGFLIIVF LIHFLWWFGV HGATIMSSFY TPIVLANMAS NAKGGFHFFA
GDPLNAFVII GGSGATLGLA IWLLFRSRST QLREIGKVEI VPAIFNINEP MLFGLPIVYN
INLIIPFICA PLASGIVSYV AITSKLVPKV ILQQPWPTPV GLSGFIATAS WKGAVLSIVD
AIVAFLVWYP FIKHYDNVLL KQEKEKAAKI
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