Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0209 |
Symbol | |
ID | 4415799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | - |
Start bp | 197377 |
End bp | 198093 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639668470 |
Product | AraC family transcriptional regulator |
Protein accession | YP_809863 |
Protein GI | 116490319 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTACAT TTTTTTCAAG ATTCAAAGAA TCAAAAATTA ATCTCAAAGA AAGTGATTTG ATTGACAGTG TAAAAAATAA TCCTTCCAAA GATCGAAAAA TTCTTCTTCC CAATAAATTC ACCTTGGCAG ATTATGAGCA GTCAGTAATC TTAATACATA AAATTTTGTC TTCTCGAAGC GAGTCTTCAT ATTTGCAAAT GAGAGATTAT CTAACTTCGG CGTTGTTAAT TCAATTATTT AATTCGTATA TTTCCAATAG CTATATAAAT GAAGAGGACA GCCGGGCCAG TTTTATTAAA GAGTGGATAA GAGCGCATAT ATCATCAACA TTAACTGTCC CAGGAATTGC TAAACAGCTC GAATTGAATC CTGATTATTT AACAAGAATA TTCAAAAAAT GTACCGGTAT GACGATGTTA CAGTATCTAA ATCATCTTAA AATCGAAGTA GCAACGACAT TACTGGTTAG AACCGAAATG TCAGTAAAAC AAATTTCTAG TCGAGCTTAC TTTAACGACT CAAAAGTATT CATTCGAAAG TTCCATCAGG AACTTGGCCT TTCTCCAACT GAATATCGTA AATCATATCA TCTGATTCAC TTAAATAATC CACACATAGA TCCTCAAATA CCAATACCTA AGGATATTGC TGATTCAATT GACTTCATTC CAGAGAATGG AAATATTAAA GAAAATGACT TCTTGGTGAA AAAATAA
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Protein sequence | MVTFFSRFKE SKINLKESDL IDSVKNNPSK DRKILLPNKF TLADYEQSVI LIHKILSSRS ESSYLQMRDY LTSALLIQLF NSYISNSYIN EEDSRASFIK EWIRAHISST LTVPGIAKQL ELNPDYLTRI FKKCTGMTML QYLNHLKIEV ATTLLVRTEM SVKQISSRAY FNDSKVFIRK FHQELGLSPT EYRKSYHLIH LNNPHIDPQI PIPKDIADSI DFIPENGNIK ENDFLVKK
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