| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0180 |
|---|
| Symbol | |
|---|
| ID | 4415984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 167187 |
|---|
| End bp | 169451 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639668443 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_809838 |
|---|
| Protein GI | 116490294 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1511] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR03057] X-X-X-Leu-X-X-Gly heptad repeats
[TIGR03061] YhgE/Pip N-terminal domain
[TIGR03062] YhgE/Pip C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0267919 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAGT GGAAACGAGT ATTTAGAAAT AAAGGTTTGG CATTTTTGTT AATCGGAATT
ATGTTTGTGC CGGCTTTGTA TGCCGTTATT TTCTTGTCTT CAATGTGGAA CGCTTATGGG
AAAGCCGGTA ACTTGCCGGT TGCAGTTGTT AATAACGATA AAGGAGCAAG CTACCAAGGC
AAGAAAATCA ATCTCGGCAG CAAGATTAAG AAACAATTGT TGAAAAACAG CGAACTTGAT
TTTCGCTCTG CAAATGAAAA ACAGGCGAAT AAACGTTTAT CAGACGGAAA ATATTATATG
TTGATCACAA TCCCGAAAAA CTTTTCCGCC AGTTCGACGA CCGTTCTAAG CAAAAATCCG
CAAGCTATCT CAATTAAATA TGTACATAAT TCTGGTCTAA ACTTTATCGC TGATAAAATG
ACGGAATCGG CTTCGCATGA AATTACAGCA ACGGTTGAAA GCCAAATTCA AAAAACTTAT
TCCAAGCAGC TTCTTTCCGG TTTGAAGAAA AGCAAAAACG GCATGAATAA GGCAGCCAAT
GGCGGTCAGA CTTTATCGAA TGGTCTTGGT CAACTTTATT CAGGGACAAC GACTGCAACG
AATGGAAGCC AAACAATTAC AAACGGATTG AATCAAGCTT CCAACAATTT GCCAACCATG
AGTTCGGGCG CTTCACAACT AGCATCGGGT AATTCGGAGC TTTCGAGCAG TTTGGCAGCT
GTCGCAGAGT CGATTGACAG CAAACAAGCT GCCAGCAAAT CACAAATTGA TCAATTAACT
AGCGGATTAA ATCAATTAAC TGCCGGACTT AAACAATTAT CATCATTGCC AACAACTCTG
CCACAATCTC CCGATGAACA AAAAATCGAA AACAGTATGA ATCATATCAA AAGCAGTCTG
ACAACTACCG GTACAGCAAC AAAATCGGCC GCTGCCTCGA TTCAAGCAGC TGGAGCTTCG
GCCACTTCGG CTGGAAGCGA TATTCAAACG GCTGGGACCT CTGCGGCAAA AATAGCTGAA
CTAATTCCCA AGATAGCAGA AACGAATCCT CAATTGGCTT CTGAGCTTAA AAAAGATTTG
GAAGATATTG ATTCTTCTCT GACCTCTGCA GGAAACAATA TCAAAGCGGT TGGTCCCTCT
CTTTCCAGTG CCGGCAACCA ATTGAGTTCA ATCGGCAACA GTACAAGTTC AGCTGGTAGT
TCTTTACAAA CTGTCGCGAC GCAGTTAAAT ACTTTGCAGC AGATGCTGCC TTTGCTAAAA
GAACTTGAAA ATAAATTGCC TGAACTAAAA AAATTAGGTA CACAGGGACC GACAGCCACT
TCCGGAGCAG TGTCGGCAAT TGAGAACCTT GAGAGTAGTC TTTCTACAAT TTCCATTGGA
ATAAAAACCC AGGCTGTTCC TGCAAGTAAT AAACTCGCCA ATGGAGCCAG CCAATTATAT
TCTGGTTTCA ATACACTACA GTCTGGCGTT GATAAACTTT CAAGTGGTTC AAACAATTTG
ACAAGCGGCT TGAAGACGCT GGCTTCAAGT ACGCAGACCG CTCAAAGCGG TAGCCAGAAA
TTGACTTACC AGCTGCGTAA CGGTACAAAG AAACTGGCGA CAATTTCCAC TAAACAAGTT
AATGTCAAGC ATCTGTCCAA ACCTTTGAAG GCCAAGGATT CGGATACGCA TAAAGTTCCG
AACATGGGAA CCGGTTTATC TCCTTACATG ATTGCCGTTG GTTTATTCGT CGGGGCCTTA
GCAACCGGTA TTTTCTATAA CTTAAACGAA GTCGAATATA AACCACGTAC GGTTCGCGAA
TGGTTTTTCC AAAAAGCCGC TGTTTTCGTC ACAATTGCAG TGGCTCAGGG ATTAATTGTG
ATTGGCGGTT TAATTATTTT TGATGGTTTA AAACCGAATC AGATAGGAAT GACTTTCTTG
GTTGCGATTA TTTCTGCCTT GGCCTATATG CTCTTTGTTT TAATGATGAA TTTGTTCTTT
GGCCATGTAG GCTCGGCAGT TGCTTTAGTC TTGTTAGTCC TCCAACTTTC CGGATCGGCT
GGGACATATC CGATTCAGCT CTCCAATGCT TTCTTTGAAG CAATTCATCC TTATCTGCCA
ATGACATATA CGGTCGAGGC TTTAAGAAAG ACTATTTCTT TAAATGGAAA CCCTGCTTTC
GATCTGATCT TATTATTGAT TTTTGGCCTT GTCAGTCTTG CTCTAATGTT GATTGGTATG
ACGATCAGAC GAAACAGATT GGTTGAAACA TCCTTGGTAA ATTAA
|
|---|
| Protein sequence | MKEWKRVFRN KGLAFLLIGI MFVPALYAVI FLSSMWNAYG KAGNLPVAVV NNDKGASYQG
KKINLGSKIK KQLLKNSELD FRSANEKQAN KRLSDGKYYM LITIPKNFSA SSTTVLSKNP
QAISIKYVHN SGLNFIADKM TESASHEITA TVESQIQKTY SKQLLSGLKK SKNGMNKAAN
GGQTLSNGLG QLYSGTTTAT NGSQTITNGL NQASNNLPTM SSGASQLASG NSELSSSLAA
VAESIDSKQA ASKSQIDQLT SGLNQLTAGL KQLSSLPTTL PQSPDEQKIE NSMNHIKSSL
TTTGTATKSA AASIQAAGAS ATSAGSDIQT AGTSAAKIAE LIPKIAETNP QLASELKKDL
EDIDSSLTSA GNNIKAVGPS LSSAGNQLSS IGNSTSSAGS SLQTVATQLN TLQQMLPLLK
ELENKLPELK KLGTQGPTAT SGAVSAIENL ESSLSTISIG IKTQAVPASN KLANGASQLY
SGFNTLQSGV DKLSSGSNNL TSGLKTLASS TQTAQSGSQK LTYQLRNGTK KLATISTKQV
NVKHLSKPLK AKDSDTHKVP NMGTGLSPYM IAVGLFVGAL ATGIFYNLNE VEYKPRTVRE
WFFQKAAVFV TIAVAQGLIV IGGLIIFDGL KPNQIGMTFL VAIISALAYM LFVLMMNLFF
GHVGSAVALV LLVLQLSGSA GTYPIQLSNA FFEAIHPYLP MTYTVEALRK TISLNGNPAF
DLILLLIFGL VSLALMLIGM TIRRNRLVET SLVN
|
|---|
| |