| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0176 |
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| Symbol | |
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| ID | 4416743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 164107 |
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| End bp | 165015 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639668439 |
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| Product | pseudouridylate synthase, 23S RNA-specific |
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| Protein accession | YP_809834 |
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| Protein GI | 116490290 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTCT ACCAATATAG TTTTATAATC CCGAACAATT TTGTCAGTAA AAGTGTCAAG
GAATTACTAA CCGGTTTGCT ATTTCCACGG TCGATTCGTG GTCTTTTACG GCAAAAAAAA
CGTCTGCTTC TTAATGGACG AAATATTCCG ACTTCAGAAC TTGTTTCACC GGGAGACAAA
TTATCTTTTT CTCTGGAAAC ATCTGATTTT TCCAAAGGGC AGAACTATCT CCCGAACAAC
GATCGGCGGT TACGAATATT ATCCGAAAAA GAAGACTATT TGCTTGTCGA CAAACCGGCC
GGTATGAAAA TGCATCCGCA TTCGCCGAAT GAAACGGATA CACTTTTAAA TTATGTTGAA
GCTCAGTTAA AAGGGCACCT ATCTCGATCC TGCCCGGCGC ATGCTTTTAT GGTGCATCGA
ATTGATCGAG ATACTTCTGG AGTTGTGATT ATAGCTAAGA ATCCACTGGC AGTGGGCATT
TTGGATCAAC TGCTTGCTAA AAAAAGAATT AAACGAACTT ATTTGGCTTG GGTCTCCGGG
AATCTGGAAA ATAAAAAAGG AAGCATTGAT CAAGCAATCG CGGTTGATCC GATTAATCCT
TATAAGAGAA TTGTCGACCA AGCAGGTCAA AAAGCAGTTA CTCATTGGAC TAAAATTCAT
ACTGTTTATC AAAACACACT TGTGCGGGTT AGCTTGGAGA CCGGTCGAAC TCATCAAATT
CGTGTTCATT TTGCTGCGAT TGGCCATCCG ATTGTTGGGG ACCATCTTTA TAATGGATTG
GCTTATAGCA GATTGCTGCT GCATTCGGCA ACGATCGAAA TTCCAGAACT TTTTTCAGAG
TCACGGCAAA GCCATACTAT TACGACTGCG ATTCCAAAGG ACTTTCCCAG ACAACTCAAA
CTCGATTAA
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| Protein sequence | MPFYQYSFII PNNFVSKSVK ELLTGLLFPR SIRGLLRQKK RLLLNGRNIP TSELVSPGDK
LSFSLETSDF SKGQNYLPNN DRRLRILSEK EDYLLVDKPA GMKMHPHSPN ETDTLLNYVE
AQLKGHLSRS CPAHAFMVHR IDRDTSGVVI IAKNPLAVGI LDQLLAKKRI KRTYLAWVSG
NLENKKGSID QAIAVDPINP YKRIVDQAGQ KAVTHWTKIH TVYQNTLVRV SLETGRTHQI
RVHFAAIGHP IVGDHLYNGL AYSRLLLHSA TIEIPELFSE SRQSHTITTA IPKDFPRQLK
LD
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