| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0107 |
|---|
| Symbol | |
|---|
| ID | 4415766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 100664 |
|---|
| End bp | 101941 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639668372 |
|---|
| Product | trypsin-like serine protease |
|---|
| Protein accession | YP_809767 |
|---|
| Protein GI | 116490223 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGAAG AACAAGACCA AGGAAAAACG CAAAAAGATA TCCAAGGCAA AAAGCCGAAA
AAAAATCGTC CCATTGGTCG GATTATTGCA ACTGCTCTTT TGGCTGGTCT TCTCGGTGGC
GGTGTCGCTG TTGGAGCAGG CTATATTTAT ACGCAAACGA CTGATTTTAT TGGAAAATCG
ACCGGTGCCT TAAGCGATGG TAAGACAACT ATTAAGGCCC CGACAATATC CGGAAAATCG
AATGCTACTA AGGTTTATAA CAATCTAAAG GGAGCAGTTG TTTCCGTTAT AAATCAACAG
GCGACCAGCA GTAGCTCGAC AATTTACGGC GATAGTTCTA AAAAATCTTC CTCGAGCACC
AGCTCCTTTT CGACGCTCCA GACAGCCTCC GAAGGGTCCG GCGTTATTTA TAAAGATGCT
GACGGGTATG CTTACATCGT CACTAATTAT CATGTAATTT CCGGAGCCAA GAGAATTCAG
GTTGTTCTTT ATGGCGGTAC AAAGGTAGTC GCTAAAAAAG TCGGTTCCGA TGCGATGACA
GACTTGGCTG TTTTAAGAAT ATCGGGCAGT GATGTTAAAA CGGTCGCGCA ATTCGGAAAC
TCTAATCAAA TTAAAACCGG CCAAACTGTT TTGGCGATTG GCTCGCCGCT CGGAACTGAT
TACGCCTCTT CTGTTACCGA GGGGATTATT TCAGCTTCCA AACGTCTCGT TTCCAATACA
TCGGAAAGCG GAAAAACAAA TTATGGCGAT TCGATTGCTA TTCAGACGGA TGCTGCAATT
AATCCAGGGA ATTCCGGCGG TCCACTTGTT AACACTTCCG GCCAGGTTAT CGGCATTAAT
TCCCAAAAAT TGACCGAAAC CGATGAAGGC GAGTCCGTCG AGGGAATGGG TTTTGCAATT
CCTTCAAATA CAGTCGTTTC AATTATTAAC AAATTGATTA AATACGGAAA AGTTGTTCGC
CCGGCTTTAG GAGTCGAAGT CGTCGATCTC AGCGAAGTAT CGAGCGATGT TGTTAAAAAG
ACACTTAAAT TGCCAAGCAA GGTTAAGACT GGAATCGTTA TTGCCGGCTT TTCAAGTGAT
AAATCACCAG CCAAGAAGGC CGGTATCAAG AAATACGATG TCATTGTTGC CGTAAACGGC
GAGAAAGTTT CCAATCTGGC TGATATGCGC GATATTATTT ATAAGCTCAA AGTCGGTGAT
ACAGTTAAAA TTACTTATTA TCGAGCTTCG ACTGAAAAAA CAGTCAAGGT TAAGATGACT
GAAACTTTGA AACAATAA
|
|---|
| Protein sequence | MTEEQDQGKT QKDIQGKKPK KNRPIGRIIA TALLAGLLGG GVAVGAGYIY TQTTDFIGKS
TGALSDGKTT IKAPTISGKS NATKVYNNLK GAVVSVINQQ ATSSSSTIYG DSSKKSSSST
SSFSTLQTAS EGSGVIYKDA DGYAYIVTNY HVISGAKRIQ VVLYGGTKVV AKKVGSDAMT
DLAVLRISGS DVKTVAQFGN SNQIKTGQTV LAIGSPLGTD YASSVTEGII SASKRLVSNT
SESGKTNYGD SIAIQTDAAI NPGNSGGPLV NTSGQVIGIN SQKLTETDEG ESVEGMGFAI
PSNTVVSIIN KLIKYGKVVR PALGVEVVDL SEVSSDVVKK TLKLPSKVKT GIVIAGFSSD
KSPAKKAGIK KYDVIVAVNG EKVSNLADMR DIIYKLKVGD TVKITYYRAS TEKTVKVKMT
ETLKQ
|
|---|
| |