| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0099 |
|---|
| Symbol | |
|---|
| ID | 4415758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 91339 |
|---|
| End bp | 91875 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 639668366 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_809762 |
|---|
| Protein GI | 116490218 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTAG GTGAATCTTT AAAATCTGCT AGAAATGCTG TTGGCTTAAC TCAAGACCAA
GTCGCAAAGA AAATGTATGT GACTAGGCAA ACTGTTTCCA GATGGGAACA GGGAAAAACG
CTGCCAAATA TATATGTGCT TAGAGAGCTT AAACAACTCT ATGGTTTATC TTTAGATAAT
CTTTCTTTAC AAACGAAAAG AAATGAGGAA TTTAGAAAAA TGAAAAAGAT TAATTGGTTA
GCTTTGTTCG GTGCCATCAT ATTTAATTTG TGTCTTTTTT CTAGTGTTTT GATCACTGCA
GCTGGTTTAC TTTTATCTAT TTGGACAATT TCAATTAGTT TTATATTTTC TCCGATAATA
TTATTAATCG TTAATTTACT GGGCTTACAA TCATTTTCTT TAATTCAAAC AAGTCTAAGT
ATCGTCTTTT TTATCATTGG CATATTTTTA TATCCTTTTG CTAAAAAAGT TAGTTATTAT
CTAATAGATT TCTTGATTAA ATATCTTCGA TTTAATCAAA GAGCCATTTA TAAATAA
|
|---|
| Protein sequence | MSLGESLKSA RNAVGLTQDQ VAKKMYVTRQ TVSRWEQGKT LPNIYVLREL KQLYGLSLDN
LSLQTKRNEE FRKMKKINWL ALFGAIIFNL CLFSSVLITA AGLLLSIWTI SISFIFSPII
LLIVNLLGLQ SFSLIQTSLS IVFFIIGIFL YPFAKKVSYY LIDFLIKYLR FNQRAIYK
|
|---|
| |