Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0097 |
Symbol | |
ID | 4415756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 88042 |
End bp | 89523 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639668364 |
Product | major facilitator superfamily permease |
Protein accession | YP_809760 |
Protein GI | 116490216 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000342925 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAA AAGAAGGAAT TATCGATAAA ACAACGATGA CGACCGCTTG GGTTTTGGTT TTTGGTGCGC TCGCGCCATT ACTAGACTCA ACAATGATTA ATATTGCTGT GCACAGTTTA GTAAGGAACT TACATAGTTC TGTCTCAACC ATCCAATGGG CCGTCACTGG TTATGTTCTA GCCACGGCCA TTGCCGTGAC TTTCTCAAGT TGGCTGTTAA ATCAATTTGA CGGAAAAAAG GTTTTTCTAG CTGGTGAAAT TATATTCGCA TTTGGCTCAG TCTTATCGGC TTTAGCAATT AATGCTCAGT TTCTGATTGG AGCAAGATTA ATTCAGGGGT TTGCCGGTGG AATAATTATG CCTTTACTAA CAACTTTGTT AGTTCAAACG GCAGGACAAA AAGTGATGGG CCAAATGATG GCCACAGTTG GATTGCCGAT TATTATTGGG CCGTTAGTTG GGCCTATAAT CGGAGGGATC ATCATTAAAT ATCTCTCTTG GCAATGGATT TTTTGGGTTA ATGTGCCAGT GGCTGTTATT TCAATTCTGC TGATTTTATG GAAGATGCCT AGTTATCCGG CCCAAAATAA GTCAGCGAAA ATGGATTTCG TTGGAATTGT TTTCCTAGCT GGTGCGACAA CCAGCATGAT CTATGGGATT GTCAAAGCCG CTAGAAAGGC CAGTTTCGCC AATAAAGACA CACTACTTTT CATTGGATTA GGTTTAGCTT TAGCTCTTCT CTATGTATTT TGGGCAATGC GAATCAAAGA CAAAGCTGTT CTACCACTGA ATTTGTTTAA ATATCGTTCC TTTAATGGAT CGGTCTTAGG ACTGCTAATT GCCGGAACGG TTTTAAATGG TGCGATGTTA GCTTTGCCTC TCTTTTTCCA AGAAGTGCGT GGCATGAGTG TCATGATGGC CGGATTAGCT CTGATTCCGC AAGGTGCTGG TATGCTGGTC TCAAGAACAT TAACGGGCAA ATTAACAGAT AAATTTGGTG CTAAATATGT AGTATTGACC AGTCTTATTA TTACTTTTAT TGGCACAATT CCTTTTTACT GGTTTAACCA CGAGACATCC TATTGGATAA TTGCACTCGT TCTTTTCGTT CGGGGAATTG GCGCTGGTGG AATTTTGATG CCACTCATGG CTGATTCCTA TACAGGTATG CAAGGAGCAT TAATTCCAGC CGCGTCGATT GGTTCACGCA CGATTCAAAA TATTGGTAGT GCTTTTGGCA CGGCAATTAT CACTACACTG ATCACGGCCT ATTCGAACGC CAAAATCAAA GGATTCAAAC AAAATATTTC AAGCGCTAAT TACCATGTTA AAGCCGCGAA TATGTCTCAA TTTGTTGCAC GACATTTAGA CTTGATTCAA ATACACGCTT TTCAATATGG TTTTTTCTGT ATTTCAATTG CTGCATTATT AATTGCTTTG CCAACTTTTC TATTGACTAA CAAAATTGAA AAGAATCAGT AG
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Protein sequence | MNQKEGIIDK TTMTTAWVLV FGALAPLLDS TMINIAVHSL VRNLHSSVST IQWAVTGYVL ATAIAVTFSS WLLNQFDGKK VFLAGEIIFA FGSVLSALAI NAQFLIGARL IQGFAGGIIM PLLTTLLVQT AGQKVMGQMM ATVGLPIIIG PLVGPIIGGI IIKYLSWQWI FWVNVPVAVI SILLILWKMP SYPAQNKSAK MDFVGIVFLA GATTSMIYGI VKAARKASFA NKDTLLFIGL GLALALLYVF WAMRIKDKAV LPLNLFKYRS FNGSVLGLLI AGTVLNGAML ALPLFFQEVR GMSVMMAGLA LIPQGAGMLV SRTLTGKLTD KFGAKYVVLT SLIITFIGTI PFYWFNHETS YWIIALVLFV RGIGAGGILM PLMADSYTGM QGALIPAASI GSRTIQNIGS AFGTAIITTL ITAYSNAKIK GFKQNISSAN YHVKAANMSQ FVARHLDLIQ IHAFQYGFFC ISIAALLIAL PTFLLTNKIE KNQ
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