| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0092 |
|---|
| Symbol | |
|---|
| ID | 4415751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 82607 |
|---|
| End bp | 83566 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639668360 |
|---|
| Product | Beta-lactamase class C related penicillin binding protein |
|---|
| Protein accession | YP_809756 |
|---|
| Protein GI | 116490212 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTATTTAT CATCAAAAGC AGAAGTTATT ATTAAAAAAA TTATCGGTTT ATATCCAGAA
AGTACGCTTT CAATCGGTAC TTTTTATCAG GAAAAATTAT CATGGCGAGC GTATGGTAAA
AACTGCCGCC TGAATAAGGA AAAGTTGCAA AATTATGAAA TTGGTTCGCT AACGAAAGTT
TTCACAGCTT TTTATTTTAT TGAATTATTC AAGGAAAAAA TTGTGACAAG TCAAACCAAA
ATAAATGAAG TTGTTTCTAA TTTACCTACA AAAAATTATC CAACAATTGG CGAGTTACTG
ACGCACCAAT CGGGTTATGG CTATTTAATC CCTCTAAAGC TAAGCGACTT GATTGGGATT
ATTAAACATA AAGGCATTCG TCGGTACAAT CCTTACGAGA GCAATATGTG TGCAGATAAT
GTTAGAAAAA TCTTGATTGA AAAGAAAATT CCAACTCATC GTAGACGCGT ATATTCCAAT
TTCGGATATG CTGTTTTAGG TCTTATCCTT TCAGAATTAG AGGCTAAAAA CTATGAAGAG
TGTATTAACG CATTTTCTAA GAAGAAGTTG GGTTTAAACC ATACTAATTT TGGCAATACT
GATTTATTAC CAGGTTATTT TAGAAATAAA AATTATGGCA ATTGGCAATG GCTTGATTGC
GGAAATAATC TTGGTAAGGC TACTGGCGGG CTTAGATCCA ACGTAGTAGA TATGTTGAAG
TTTTCAAGTA AAATACTTGC GGAATCGACC TTTTTAAAGC GAGCAGAACC TTTTTCATTG
ATGGGGATGT TTAAAAGGCA AGATGGAATT TGGATGAAAA TCGGCCAGAC CGGAACACAA
TTATCAGTCA TGATGATTGA TACTGAAAGC AGTTCGTCTG CTGTTGTTTT AGTTAATTGT
TTGAATAAAT ACAGTGTTTC CTTGGCCAGA GAACTACTTT TAAGAGTCTT TGAAGAGTAA
|
|---|
| Protein sequence | MYLSSKAEVI IKKIIGLYPE STLSIGTFYQ EKLSWRAYGK NCRLNKEKLQ NYEIGSLTKV
FTAFYFIELF KEKIVTSQTK INEVVSNLPT KNYPTIGELL THQSGYGYLI PLKLSDLIGI
IKHKGIRRYN PYESNMCADN VRKILIEKKI PTHRRRVYSN FGYAVLGLIL SELEAKNYEE
CINAFSKKKL GLNHTNFGNT DLLPGYFRNK NYGNWQWLDC GNNLGKATGG LRSNVVDMLK
FSSKILAEST FLKRAEPFSL MGMFKRQDGI WMKIGQTGTQ LSVMMIDTES SSSAVVLVNC
LNKYSVSLAR ELLLRVFEE
|
|---|
| |