Gene OEOE_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_0047 
Symbol 
ID4416215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand- 
Start bp43916 
End bp44494 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content37% 
IMG OID639668320 
ProductXRE family transcriptional regulator 
Protein accessionYP_809716 
Protein GI116490172 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.139805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTCA GTGAAATTAT CTCCAGTAAA AGAAGAGAAT TGGGCATGAC TCAAGATCAA 
GTAGCCGAAC TTTTGTATGT CAGCCGCCAA GCCTTATCGA ACTGGGAAAA AGGTAAAAAT 
TATCCGGATC TGGATACCTT GGTTGAACTA AGCAAAATAT ACGACCTGTC TTTAGATGTA 
TTGATTAAAG GAGACAAAAA GGTTATGAAA AAAGTTCAGG AAGATTCGCA GGATCTTAGA 
AAACAAAAGA AATTAAGAGT GCTCGATATC TCTTTGGCCG CTGTAATCGT AATCTTAATC 
CTGGTTCCGG TCTTATTGAA CTTTTTTGGT GATAGAAACA TTTTGAATGG TCATCTTATG 
AGCGGCCTGA TGTCTATCCT GATTATGTAT ATTATGATTG CTTCTTTGTG GCATTATCAT 
CTGGCCTATC CAGGGCCAAT TAGTAAACAA GCACCGATTC TGATTCCTAA AAGTTTTGGG 
ATTGGCTTGA CGATAAATCC GCAAAGTCCG ATCGGATTGG CAATCTGGAT TATTTTATTA 
GTTATTATCG TAATAGCGTT CATGCCAATG ATTTTTTGA
 
Protein sequence
MVFSEIISSK RRELGMTQDQ VAELLYVSRQ ALSNWEKGKN YPDLDTLVEL SKIYDLSLDV 
LIKGDKKVMK KVQEDSQDLR KQKKLRVLDI SLAAVIVILI LVPVLLNFFG DRNILNGHLM 
SGLMSILIMY IMIASLWHYH LAYPGPISKQ APILIPKSFG IGLTINPQSP IGLAIWIILL 
VIIVIAFMPM IF